Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 AGGF1P2-201ENST00000426656 2106 ntBASIC16.46■□□□□ 0.23
BRF2Q9HAW0 AC004817.3-201ENST00000602957 2129 ntBASIC16.46■□□□□ 0.23
BRF2Q9HAW0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 RBM17P3-201ENST00000417687 1192 ntBASIC16.46■□□□□ 0.23
BRF2Q9HAW0 AC132008.2-207ENST00000454517 770 ntBASIC16.46■□□□□ 0.23
BRF2Q9HAW0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 AP001269.4-201ENST00000609611 512 ntBASIC16.46■□□□□ 0.23
BRF2Q9HAW0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRF2Q9HAW0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
BRF2Q9HAW0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.46■□□□□ 0.22
BRF2Q9HAW0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.22
BRF2Q9HAW0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BRF2Q9HAW0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 LINC00982-205ENST00000420957 435 ntBASIC16.45■□□□□ 0.22
BRF2Q9HAW0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 FOSL1P1-201ENST00000511041 816 ntBASIC16.45■□□□□ 0.22
BRF2Q9HAW0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRF2Q9HAW0 TUBB8P12-201ENST00000308911 1335 ntBASIC16.45■□□□□ 0.22
BRF2Q9HAW0 TUBB7P-202ENST00000428444 1305 ntBASIC16.45■□□□□ 0.22
BRF2Q9HAW0 TUBB8P7-204ENST00000567960 1332 ntBASIC16.45■□□□□ 0.22
BRF2Q9HAW0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 AP002490.2-201ENST00000524791 560 ntBASIC16.44■□□□□ 0.22
BRF2Q9HAW0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 MIR3652-201ENST00000579335 131 ntBASIC16.44■□□□□ 0.22
BRF2Q9HAW0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
BRF2Q9HAW0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms