Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 ACTG1P4-201ENST00000425123 1122 ntBASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.49■□□□□ 0.39
LRRC40Q9H9A6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 AC079776.2-201ENST00000641154 1609 ntBASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 AC105020.1-201ENST00000435356 2205 ntBASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
LRRC40Q9H9A6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 NUS1P1-201ENST00000446295 882 ntBASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 FOSL1P1-201ENST00000511041 816 ntBASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 AC005915.1-201ENST00000624912 2018 ntBASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC40Q9H9A6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRRC40Q9H9A6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms