Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF41Q9H4P4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
RNF41Q9H4P4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF41Q9H4P4 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.27■□□□□ 0.83
RNF41Q9H4P4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF41Q9H4P4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF41Q9H4P4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 AC108073.2-201ENST00000464002 357 ntBASIC20.26■□□□□ 0.83
RNF41Q9H4P4 AC124947.2-201ENST00000547118 1133 ntBASIC20.26■□□□□ 0.83
RNF41Q9H4P4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.26■□□□□ 0.83
RNF41Q9H4P4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF41Q9H4P4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 ZNF259P1-201ENST00000407656 1365 ntBASIC20.25■□□□□ 0.83
RNF41Q9H4P4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 AC104109.2-201ENST00000602919 1418 ntBASIC20.25■□□□□ 0.83
RNF41Q9H4P4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
RNF41Q9H4P4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 MRPL20P1-201ENST00000400819 433 ntBASIC20.24■□□□□ 0.83
RNF41Q9H4P4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 PRSS29P-201ENST00000440800 595 ntBASIC20.24■□□□□ 0.83
RNF41Q9H4P4 SLC25A1P1-201ENST00000528351 927 ntBASIC20.24■□□□□ 0.83
RNF41Q9H4P4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 AC108860.2-201ENST00000562760 2183 ntBASIC20.24■□□□□ 0.83
RNF41Q9H4P4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF41Q9H4P4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF41Q9H4P4 FRMD8P1-201ENST00000440433 1524 ntBASIC20.23■□□□□ 0.83
RNF41Q9H4P4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF41Q9H4P4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms