Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
HIPK3Q9H422 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIPK3Q9H422 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.71■□□□□ 0.59
HIPK3Q9H422 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIPK3Q9H422 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
HIPK3Q9H422 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.71■□□□□ 0.58
HIPK3Q9H422 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIPK3Q9H422 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIPK3Q9H422 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIPK3Q9H422 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIPK3Q9H422 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.7■□□□□ 0.58
HIPK3Q9H422 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HIPK3Q9H422 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIPK3Q9H422 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HIPK3Q9H422 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIPK3Q9H422 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.7■□□□□ 0.58
HIPK3Q9H422 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.7■□□□□ 0.58
HIPK3Q9H422 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIPK3Q9H422 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIPK3Q9H422 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.7■□□□□ 0.58
HIPK3Q9H422 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIPK3Q9H422 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.7■□□□□ 0.58
HIPK3Q9H422 AC069120.2-201ENST00000524091 540 ntBASIC18.7■□□□□ 0.58
HIPK3Q9H422 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIPK3Q9H422 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.7■□□□□ 0.58
HIPK3Q9H422 AC005412.3-201ENST00000580309 715 ntBASIC18.7■□□□□ 0.58
HIPK3Q9H422 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIPK3Q9H422 MIR6080-201ENST00000617359 66 ntBASIC18.7■□□□□ 0.58
HIPK3Q9H422 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.7■□□□□ 0.58
HIPK3Q9H422 AC084121.4-201ENST00000641598 221 ntBASIC18.7■□□□□ 0.58
HIPK3Q9H422 AF228730.8-201ENST00000642140 221 ntBASIC18.7■□□□□ 0.58
HIPK3Q9H422 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HIPK3Q9H422 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HIPK3Q9H422 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HIPK3Q9H422 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIPK3Q9H422 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HIPK3Q9H422 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
HIPK3Q9H422 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIPK3Q9H422 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.69■□□□□ 0.58
HIPK3Q9H422 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIPK3Q9H422 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HIPK3Q9H422 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.69■□□□□ 0.58
HIPK3Q9H422 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.69■□□□□ 0.58
HIPK3Q9H422 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIPK3Q9H422 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HIPK3Q9H422 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HIPK3Q9H422 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.69■□□□□ 0.58
HIPK3Q9H422 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.69■□□□□ 0.58
HIPK3Q9H422 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HIPK3Q9H422 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIPK3Q9H422 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIPK3Q9H422 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIPK3Q9H422 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIPK3Q9H422 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.69■□□□□ 0.58
HIPK3Q9H422 AC012569.1-201ENST00000591191 1524 ntBASIC18.69■□□□□ 0.58
HIPK3Q9H422 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIPK3Q9H422 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.69■□□□□ 0.58
HIPK3Q9H422 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIPK3Q9H422 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HIPK3Q9H422 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.68■□□□□ 0.58
HIPK3Q9H422 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HIPK3Q9H422 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.68■□□□□ 0.58
HIPK3Q9H422 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.68■□□□□ 0.58
HIPK3Q9H422 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.68■□□□□ 0.58
HIPK3Q9H422 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.68■□□□□ 0.58
HIPK3Q9H422 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.68■□□□□ 0.58
HIPK3Q9H422 AC097493.3-201ENST00000509725 367 ntBASIC18.68■□□□□ 0.58
HIPK3Q9H422 AP005018.1-201ENST00000525475 301 ntBASIC18.68■□□□□ 0.58
HIPK3Q9H422 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.68■□□□□ 0.58
HIPK3Q9H422 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.68■□□□□ 0.58
HIPK3Q9H422 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.68■□□□□ 0.58
HIPK3Q9H422 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HIPK3Q9H422 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.68■□□□□ 0.58
HIPK3Q9H422 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.68■□□□□ 0.58
HIPK3Q9H422 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.68■□□□□ 0.58
HIPK3Q9H422 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 FLJ13224-201ENST00000313737 1514 ntBASIC18.68■□□□□ 0.58
HIPK3Q9H422 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.68■□□□□ 0.58
HIPK3Q9H422 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIPK3Q9H422 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK3Q9H422 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.67■□□□□ 0.58
HIPK3Q9H422 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIPK3Q9H422 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms