Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 AL050303.2-201ENST00000619798 666 ntBASIC13.98□□□□□ -0.17
NKX6-2Q9C056 AL445675.2-201ENST00000620291 557 ntBASIC13.98□□□□□ -0.17
NKX6-2Q9C056 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.98□□□□□ -0.17
NKX6-2Q9C056 MYC-209ENST00000641252 345 ntBASIC13.98□□□□□ -0.17
NKX6-2Q9C056 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-2Q9C056 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 POM121L13P-201ENST00000422362 380 ntBASIC13.97□□□□□ -0.17
NKX6-2Q9C056 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-2Q9C056 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 GRK6P1-201ENST00000400595 1711 ntBASIC13.96□□□□□ -0.17
NKX6-2Q9C056 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 KIRREL3-AS3-201ENST00000404882 831 ntBASIC13.96□□□□□ -0.17
NKX6-2Q9C056 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.96□□□□□ -0.17
NKX6-2Q9C056 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 AC026185.1-201ENST00000445748 174 ntBASIC13.96□□□□□ -0.17
NKX6-2Q9C056 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 AC080038.1-201ENST00000611274 1154 ntBASIC13.96□□□□□ -0.17
NKX6-2Q9C056 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-2Q9C056 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.96□□□□□ -0.18
NKX6-2Q9C056 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX6-2Q9C056 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX6-2Q9C056 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.18
NKX6-2Q9C056 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX6-2Q9C056 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX6-2Q9C056 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NKX6-2Q9C056 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NKX6-2Q9C056 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms