Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 AC092053.1-201ENST00000605787 1936 ntBASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 TSPY19P-201ENST00000418461 509 ntBASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 TSPY18P-201ENST00000441642 509 ntBASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 AC091304.2-201ENST00000564639 760 ntBASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 IGHV3-41-201ENST00000613121 348 ntBASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXP3Q9BZS1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 AC012615.1-201ENST00000565797 1299 ntBASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 AC138894.3-201ENST00000603787 634 ntBASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXP3Q9BZS1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 AC018695.7-201ENST00000624587 2492 ntBASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 KRT17P6-201ENST00000453795 1220 ntBASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 AC009078.2-202ENST00000463353 338 ntBASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 GPR32P1-201ENST00000601788 811 ntBASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 AL390719.2-201ENST00000606993 987 ntBASIC17.77■□□□□ 0.44
FOXP3Q9BZS1 AL121772.3-201ENST00000610840 674 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms