Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 AC142381.1-201ENST00000426099 345 ntBASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 AC241585.1-201ENST00000433527 519 ntBASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 AC027369.6-201ENST00000525520 931 ntBASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 AL138828.2-201ENST00000615812 383 ntBASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 AL353732.1-201ENST00000569618 1459 ntBASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC8.82□□□□□ -1
KRTAP4-1Q9BYQ7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 OR8S1-201ENST00000310194 1080 ntBASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 SPTLC1P1-201ENST00000447199 261 ntBASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 RN7SL692P-201ENST00000464677 288 ntBASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 MTRF1LP2-201ENST00000506027 1122 ntBASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC8.81□□□□□ -1
KRTAP4-1Q9BYQ7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms