Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 HLA-F-220ENST00000434407 884 ntBASIC10.32□□□□□ -0.76
LIMD2Q9BT23 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 NAA38-203ENST00000575071 553 ntTSL 2 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 TK1-205ENST00000590862 642 ntTSL 3 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 AC012306.2-201ENST00000609350 630 ntBASIC10.32□□□□□ -0.76
LIMD2Q9BT23 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 C1R-202ENST00000536053 2347 ntTSL 2 BASIC10.32□□□□□ -0.76
LIMD2Q9BT23 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 CD276-201ENST00000318424 2738 ntTSL 5 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 SPDYE15P-201ENST00000424157 909 ntBASIC10.31□□□□□ -0.76
LIMD2Q9BT23 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 AC117947.1-201ENST00000427448 529 ntBASIC10.31□□□□□ -0.76
LIMD2Q9BT23 KRT18P57-201ENST00000443599 1254 ntBASIC10.31□□□□□ -0.76
LIMD2Q9BT23 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 PPOX-219ENST00000544598 813 ntTSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 AC011558.1-201ENST00000623459 338 ntBASIC10.31□□□□□ -0.76
LIMD2Q9BT23 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 NF2-208ENST00000403435 2568 ntTSL 5 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 BX276092.7-203ENST00000637198 1536 ntBASIC10.31□□□□□ -0.76
LIMD2Q9BT23 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 AC132938.6-201ENST00000623828 1655 ntBASIC10.31□□□□□ -0.76
LIMD2Q9BT23 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 GNE-204ENST00000539208 2190 ntTSL 2 BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LIMD2Q9BT23 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms