Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 AC135983.4-201ENST00000564116 1262 ntBASIC5.15□□□□□ -1.59
HMCN1Q96RW7 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 5S_rRNA.22-201ENST00000614916 106 ntBASIC5.15□□□□□ -1.59
HMCN1Q96RW7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 SOCS2P1-201ENST00000417727 557 ntBASIC5.15□□□□□ -1.59
HMCN1Q96RW7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 AC105021.1-202ENST00000570572 669 ntBASIC5.15□□□□□ -1.59
HMCN1Q96RW7 AC244452.3-201ENST00000636814 210 ntBASIC5.15□□□□□ -1.59
HMCN1Q96RW7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 AC018735.1-201ENST00000437208 1502 ntBASIC5.15□□□□□ -1.59
HMCN1Q96RW7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC5.15□□□□□ -1.59
HMCN1Q96RW7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AL139008.1-201ENST00000437894 228 ntBASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AC026310.3-201ENST00000625186 2373 ntBASIC5.14□□□□□ -1.59
HMCN1Q96RW7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AL035456.1-201ENST00000456064 1369 ntBASIC5.14□□□□□ -1.59
HMCN1Q96RW7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AL009183.1-201ENST00000603760 355 ntBASIC5.14□□□□□ -1.59
HMCN1Q96RW7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AL158211.5-201ENST00000623583 2518 ntBASIC5.14□□□□□ -1.59
HMCN1Q96RW7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 PFN2-202ENST00000423691 911 ntTSL 2 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AL162726.2-201ENST00000438986 1017 ntBASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 AC091812.3-201ENST00000621362 345 ntBASIC5.14□□□□□ -1.59
HMCN1Q96RW7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMCN1Q96RW7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms