Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX11Q96FC9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX11Q96FC9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX11Q96FC9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX11Q96FC9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX11Q96FC9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX11Q96FC9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DDX11Q96FC9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX11Q96FC9 AL139327.4-201ENST00000612362 153 ntBASIC20.46■□□□□ 0.87
DDX11Q96FC9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DDX11Q96FC9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX11Q96FC9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX11Q96FC9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX11Q96FC9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX11Q96FC9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.46■□□□□ 0.87
DDX11Q96FC9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX11Q96FC9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
DDX11Q96FC9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
DDX11Q96FC9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX11Q96FC9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX11Q96FC9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
DDX11Q96FC9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX11Q96FC9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DDX11Q96FC9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX11Q96FC9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX11Q96FC9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX11Q96FC9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX11Q96FC9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
DDX11Q96FC9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX11Q96FC9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DDX11Q96FC9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX11Q96FC9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.45■□□□□ 0.86
DDX11Q96FC9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX11Q96FC9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX11Q96FC9 OR7E14P-202ENST00000530490 1290 ntBASIC20.45■□□□□ 0.86
DDX11Q96FC9 AC109462.3-201ENST00000573934 613 ntBASIC20.45■□□□□ 0.86
DDX11Q96FC9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX11Q96FC9 AC019129.2-201ENST00000609837 1235 ntBASIC20.45■□□□□ 0.86
DDX11Q96FC9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
DDX11Q96FC9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.45■□□□□ 0.86
DDX11Q96FC9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX11Q96FC9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX11Q96FC9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
DDX11Q96FC9 PMS2P7-201ENST00000506558 1336 ntBASIC20.45■□□□□ 0.86
DDX11Q96FC9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX11Q96FC9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX11Q96FC9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DDX11Q96FC9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
DDX11Q96FC9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.45■□□□□ 0.86
DDX11Q96FC9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.44■□□□□ 0.86
DDX11Q96FC9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX11Q96FC9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
DDX11Q96FC9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.44■□□□□ 0.86
DDX11Q96FC9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX11Q96FC9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX11Q96FC9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.44■□□□□ 0.86
DDX11Q96FC9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.44■□□□□ 0.86
DDX11Q96FC9 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX11Q96FC9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.44■□□□□ 0.86
DDX11Q96FC9 FAM220CP-201ENST00000395253 831 ntBASIC20.44■□□□□ 0.86
DDX11Q96FC9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.44■□□□□ 0.86
DDX11Q96FC9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.44■□□□□ 0.86
DDX11Q96FC9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.44■□□□□ 0.86
DDX11Q96FC9 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.44■□□□□ 0.86
DDX11Q96FC9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.44■□□□□ 0.86
DDX11Q96FC9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.44■□□□□ 0.86
DDX11Q96FC9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.44■□□□□ 0.86
DDX11Q96FC9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX11Q96FC9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX11Q96FC9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
DDX11Q96FC9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX11Q96FC9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX11Q96FC9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.44■□□□□ 0.86
DDX11Q96FC9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX11Q96FC9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX11Q96FC9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX11Q96FC9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX11Q96FC9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX11Q96FC9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DDX11Q96FC9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
DDX11Q96FC9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX11Q96FC9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
DDX11Q96FC9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms