Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 AC084018.2-201ENST00000613093 2607 ntBASIC16.63■□□□□ 0.25
RNF31Q96EP0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF31Q96EP0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 CROCCP1-201ENST00000426910 5675 ntBASIC16.63■□□□□ 0.25
RNF31Q96EP0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 YBX2P1-201ENST00000394192 760 ntBASIC16.63■□□□□ 0.25
RNF31Q96EP0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 KRT18P27-201ENST00000427733 1299 ntBASIC16.63■□□□□ 0.25
RNF31Q96EP0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF31Q96EP0 AC112482.1-201ENST00000492080 688 ntBASIC16.63■□□□□ 0.25
RNF31Q96EP0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF31Q96EP0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF31Q96EP0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
RNF31Q96EP0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF31Q96EP0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF31Q96EP0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.63■□□□□ 0.25
RNF31Q96EP0 FAM197Y3-203ENST00000618346 717 ntBASIC16.63■□□□□ 0.25
RNF31Q96EP0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF31Q96EP0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF31Q96EP0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RNF31Q96EP0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF31Q96EP0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF31Q96EP0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.62■□□□□ 0.25
RNF31Q96EP0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 AC092183.1-201ENST00000469884 875 ntBASIC16.62■□□□□ 0.25
RNF31Q96EP0 AC136632.2-201ENST00000512891 861 ntBASIC16.62■□□□□ 0.25
RNF31Q96EP0 RNA5SP416-201ENST00000516838 111 ntBASIC16.62■□□□□ 0.25
RNF31Q96EP0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 LINC00896-202ENST00000609602 2128 ntBASIC16.62■□□□□ 0.25
RNF31Q96EP0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 AC092865.6-201ENST00000642101 219 ntBASIC16.62■□□□□ 0.25
RNF31Q96EP0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF31Q96EP0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 AC097637.2-201ENST00000624096 1997 ntBASIC16.62■□□□□ 0.25
RNF31Q96EP0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF31Q96EP0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 AL353593.2-201ENST00000602529 1483 ntBASIC16.61■□□□□ 0.25
RNF31Q96EP0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF31Q96EP0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF31Q96EP0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms