Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 MYCLP1-201ENST00000372451 1075 ntBASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 ESRRAP1-201ENST00000400596 1257 ntBASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 AC024243.1-201ENST00000609234 778 ntBASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 AC073648.6-201ENST00000641589 218 ntBASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 AC092865.7-201ENST00000641832 219 ntBASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM4Q8WVI0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 C1QBPP2-201ENST00000528754 825 ntBASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM4Q8WVI0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.72□□□□□ -0.05
SMIM4Q8WVI0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms