Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 KLF4P1-201ENST00000412782 1185 ntBASIC17.47■□□□□ 0.39
PTCD2Q8WV60 ABCD1P5-201ENST00000445663 754 ntBASIC17.47■□□□□ 0.39
PTCD2Q8WV60 FAM197Y8-203ENST00000450145 560 ntBASIC17.47■□□□□ 0.39
PTCD2Q8WV60 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 COA4-204ENST00000541455 1038 ntTSL 5 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 AC124947.2-201ENST00000547118 1133 ntBASIC17.47■□□□□ 0.39
PTCD2Q8WV60 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PTCD2Q8WV60 HLA-A-201ENST00000376802 1334 ntBASIC17.47■□□□□ 0.39
PTCD2Q8WV60 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 AC009053.2-201ENST00000563701 2365 ntBASIC17.46■□□□□ 0.39
PTCD2Q8WV60 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 AC022211.2-201ENST00000585075 2527 ntBASIC17.46■□□□□ 0.39
PTCD2Q8WV60 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 SART3-203ENST00000546611 1184 ntBASIC17.46■□□□□ 0.39
PTCD2Q8WV60 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTCD2Q8WV60 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PTCD2Q8WV60 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
PTCD2Q8WV60 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 EGFEM1P-202ENST00000431685 1563 ntBASIC17.45■□□□□ 0.38
PTCD2Q8WV60 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 HNRNPDP1-201ENST00000439535 754 ntBASIC17.45■□□□□ 0.38
PTCD2Q8WV60 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 AL049840.3-201ENST00000602669 611 ntBASIC17.45■□□□□ 0.38
PTCD2Q8WV60 AC073592.5-201ENST00000624854 528 ntBASIC17.45■□□□□ 0.38
PTCD2Q8WV60 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 AL135999.2-201ENST00000622438 1686 ntBASIC17.45■□□□□ 0.38
PTCD2Q8WV60 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PTCD2Q8WV60 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTCD2Q8WV60 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms