Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 HCG4B-203ENST00000450128 991 ntBASIC18.48■□□□□ 0.55
BEST2Q8NFU1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
BEST2Q8NFU1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 AC092865.5-201ENST00000545435 363 ntBASIC18.47■□□□□ 0.55
BEST2Q8NFU1 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BEST2Q8NFU1 CROCCP2-202ENST00000412962 2773 ntBASIC18.47■□□□□ 0.55
BEST2Q8NFU1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 SLC25A1P3-201ENST00000395415 828 ntBASIC18.46■□□□□ 0.55
BEST2Q8NFU1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 AC087163.2-201ENST00000457299 853 ntBASIC18.46■□□□□ 0.55
BEST2Q8NFU1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 OR7E47P-204ENST00000575924 449 ntBASIC18.46■□□□□ 0.55
BEST2Q8NFU1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.46■□□□□ 0.55
BEST2Q8NFU1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST2Q8NFU1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
BEST2Q8NFU1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
BEST2Q8NFU1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 AC040169.1-201ENST00000565382 521 ntBASIC18.45■□□□□ 0.54
BEST2Q8NFU1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms