Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PAF1Q8N7H5 KRT8P10-201ENST00000450021 1447 ntBASIC17.72■□□□□ 0.43
PAF1Q8N7H5 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 STK19B-204ENST00000512515 211 ntBASIC17.72■□□□□ 0.43
PAF1Q8N7H5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 AP005117.1-201ENST00000584346 1413 ntBASIC17.72■□□□□ 0.43
PAF1Q8N7H5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PAF1Q8N7H5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 AC006116.8-202ENST00000587620 1550 ntBASIC17.71■□□□□ 0.43
PAF1Q8N7H5 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 AC002558.1-201ENST00000488906 803 ntBASIC17.71■□□□□ 0.43
PAF1Q8N7H5 AC073648.2-201ENST00000510116 352 ntBASIC17.71■□□□□ 0.43
PAF1Q8N7H5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 LINC01451-201ENST00000623792 534 ntBASIC17.71■□□□□ 0.43
PAF1Q8N7H5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PAF1Q8N7H5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms