Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 AL022342.1-201ENST00000400363 863 ntBASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 MRPL20P1-201ENST00000400819 433 ntBASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 AC034105.1-201ENST00000563488 319 ntBASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 AC106730.1-201ENST00000566722 1090 ntBASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 AC004790.2-201ENST00000623588 572 ntBASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 AC108860.2-201ENST00000562760 2183 ntBASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAM1L1Q8N609 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 FRMD8P1-201ENST00000440433 1524 ntBASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 PRSS29P-201ENST00000440800 595 ntBASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 AC087163.2-201ENST00000457299 853 ntBASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAM1L1Q8N609 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 MIR4751-201ENST00000578027 74 ntBASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 AC010654.1-201ENST00000615722 808 ntBASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAM1L1Q8N609 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAM1L1Q8N609 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAM1L1Q8N609 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.96■□□□□ 0.3
TRAM1L1Q8N609 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.96■□□□□ 0.3
TRAM1L1Q8N609 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
TRAM1L1Q8N609 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms