Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC097374.2-201ENST00000618617 1306 ntBASIC18.08■□□□□ 0.49
CCDC33Q8N5R6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 BX005266.1-201ENST00000473402 457 ntBASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 AC105339.3-201ENST00000560043 636 ntBASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 Z83851.2-201ENST00000609564 659 ntBASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 AC019129.2-201ENST00000609837 1235 ntBASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 AC099398.1-201ENST00000567919 2776 ntBASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC33Q8N5R6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 AP000867.4-201ENST00000641616 219 ntBASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC33Q8N5R6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 AL138688.1-201ENST00000624851 1594 ntBASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 AC005104.2-201ENST00000427818 678 ntBASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC33Q8N5R6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms