Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC83Q8IWF9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 PCDHB19P-201ENST00000570871 2371 ntBASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 FRMD8P1-201ENST00000440433 1524 ntBASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC83Q8IWF9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 PMPCAP1-201ENST00000508114 1576 ntBASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 AP000867.3-201ENST00000524675 377 ntBASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 AL358472.4-201ENST00000633140 710 ntBASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 AP000550.4-202ENST00000639755 178 ntBASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC83Q8IWF9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 NPAP1P7-201ENST00000613027 823 ntBASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms