Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.14■□□□□ 0.33
APLFQ8IW19 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
APLFQ8IW19 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 IGHGP-201ENST00000390555 1178 ntBASIC17.14■□□□□ 0.33
APLFQ8IW19 AL022342.1-201ENST00000400363 863 ntBASIC17.14■□□□□ 0.33
APLFQ8IW19 GUSBP12-201ENST00000513727 720 ntBASIC17.14■□□□□ 0.33
APLFQ8IW19 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.14■□□□□ 0.33
APLFQ8IW19 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.14■□□□□ 0.33
APLFQ8IW19 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.14■□□□□ 0.33
APLFQ8IW19 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
APLFQ8IW19 AL121912.1-201ENST00000603683 238 ntBASIC17.14■□□□□ 0.33
APLFQ8IW19 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 AL353801.3-201ENST00000609898 542 ntBASIC17.14■□□□□ 0.33
APLFQ8IW19 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.14■□□□□ 0.33
APLFQ8IW19 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.14■□□□□ 0.33
APLFQ8IW19 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.14■□□□□ 0.33
APLFQ8IW19 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.14■□□□□ 0.33
APLFQ8IW19 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.14■□□□□ 0.33
APLFQ8IW19 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.14■□□□□ 0.33
APLFQ8IW19 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 AL138688.1-201ENST00000624851 1594 ntBASIC17.14■□□□□ 0.33
APLFQ8IW19 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.14■□□□□ 0.33
APLFQ8IW19 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
APLFQ8IW19 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.14■□□□□ 0.33
APLFQ8IW19 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 AL499627.1-201ENST00000569373 2188 ntBASIC17.13■□□□□ 0.33
APLFQ8IW19 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APLFQ8IW19 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.13■□□□□ 0.33
APLFQ8IW19 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
APLFQ8IW19 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.13■□□□□ 0.33
APLFQ8IW19 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APLFQ8IW19 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
APLFQ8IW19 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
APLFQ8IW19 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APLFQ8IW19 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.13■□□□□ 0.33
APLFQ8IW19 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
APLFQ8IW19 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
APLFQ8IW19 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.13■□□□□ 0.33
APLFQ8IW19 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
APLFQ8IW19 SLC25A6P4-201ENST00000586535 553 ntBASIC17.13■□□□□ 0.33
APLFQ8IW19 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.13■□□□□ 0.33
APLFQ8IW19 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
APLFQ8IW19 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.13■□□□□ 0.33
APLFQ8IW19 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.13■□□□□ 0.33
APLFQ8IW19 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.13■□□□□ 0.33
APLFQ8IW19 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APLFQ8IW19 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
APLFQ8IW19 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.13■□□□□ 0.33
APLFQ8IW19 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APLFQ8IW19 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
APLFQ8IW19 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APLFQ8IW19 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APLFQ8IW19 AC007950.2-201ENST00000615045 2347 ntBASIC17.13■□□□□ 0.33
APLFQ8IW19 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.13■□□□□ 0.33
APLFQ8IW19 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
APLFQ8IW19 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
APLFQ8IW19 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.13■□□□□ 0.33
APLFQ8IW19 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APLFQ8IW19 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APLFQ8IW19 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APLFQ8IW19 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APLFQ8IW19 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APLFQ8IW19 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.12■□□□□ 0.33
APLFQ8IW19 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
APLFQ8IW19 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.12■□□□□ 0.33
APLFQ8IW19 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APLFQ8IW19 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.12■□□□□ 0.33
APLFQ8IW19 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APLFQ8IW19 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
APLFQ8IW19 IGHV3-47-201ENST00000425060 335 ntBASIC17.12■□□□□ 0.33
APLFQ8IW19 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.12■□□□□ 0.33
APLFQ8IW19 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.12■□□□□ 0.33
APLFQ8IW19 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
APLFQ8IW19 AC009065.1-201ENST00000564055 1225 ntBASIC17.12■□□□□ 0.33
APLFQ8IW19 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
APLFQ8IW19 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.12■□□□□ 0.33
APLFQ8IW19 AC099336.1-202ENST00000602961 463 ntBASIC17.12■□□□□ 0.33
APLFQ8IW19 AC024563.2-201ENST00000603282 481 ntBASIC17.12■□□□□ 0.33
APLFQ8IW19 AC138894.3-201ENST00000603787 634 ntBASIC17.12■□□□□ 0.33
APLFQ8IW19 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APLFQ8IW19 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.12■□□□□ 0.33
APLFQ8IW19 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
APLFQ8IW19 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
APLFQ8IW19 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
APLFQ8IW19 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms