Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 AC097374.2-201ENST00000618617 1306 ntBASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NUDCD3Q8IVD9 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 AL353692.3-201ENST00000407031 1396 ntBASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 AC010460.3-201ENST00000511359 1579 ntBASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 PCDHA1-201ENST00000378133 2726 ntBASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 IGHGP-201ENST00000390555 1178 ntBASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 IGHV3-52-201ENST00000519770 353 ntBASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 AC140113.3-201ENST00000605663 199 ntBASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 AL023973.1-201ENST00000624619 620 ntBASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 AL662844.4-201ENST00000606367 2838 ntBASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 AL391005.1-201ENST00000623953 2435 ntBASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NUDCD3Q8IVD9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
NUDCD3Q8IVD9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
NUDCD3Q8IVD9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 PCDHB17P-201ENST00000539533 2393 ntBASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 AP003733.1-201ENST00000491725 852 ntBASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NUDCD3Q8IVD9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 FAM8A6P-201ENST00000407496 1135 ntBASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 AC109462.3-201ENST00000573934 613 ntBASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NUDCD3Q8IVD9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms