Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRTM4Q86VH4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 SLC25A1P3-201ENST00000395415 828 ntBASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 CRYGEP-201ENST00000412192 528 ntBASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 MED15P5-201ENST00000423150 992 ntBASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 AL591424.1-201ENST00000442569 1213 ntBASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 LTB4R2-202ENST00000528054 3092 ntBASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM4Q86VH4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 PRSS29P-201ENST00000440800 595 ntBASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 PAWRP1-201ENST00000451083 565 ntBASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 AL671883.3-201ENST00000603274 991 ntBASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 AC140113.2-201ENST00000604370 208 ntBASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 AC010654.1-201ENST00000615722 808 ntBASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM4Q86VH4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 MIR940-201ENST00000401276 94 ntBASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 FAM197Y3-203ENST00000618346 717 ntBASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 PP12613-201ENST00000424958 2230 ntBASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.85■□□□□ 0.29
LRRTM4Q86VH4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRTM4Q86VH4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms