Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 KRT16P1-201ENST00000399124 1418 ntBASIC14.36□□□□□ -0.11
ZNF546Q86UE3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 FAM207BP-201ENST00000447172 505 ntBASIC14.36□□□□□ -0.11
ZNF546Q86UE3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 AC110285.5-201ENST00000611501 352 ntBASIC14.36□□□□□ -0.11
ZNF546Q86UE3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 AL031985.4-201ENST00000642138 673 ntBASIC14.36□□□□□ -0.11
ZNF546Q86UE3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF546Q86UE3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.35□□□□□ -0.11
ZNF546Q86UE3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 AC133681.1-201ENST00000465482 601 ntBASIC14.35□□□□□ -0.11
ZNF546Q86UE3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZNF546Q86UE3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 AC233263.1-201ENST00000578059 224 ntBASIC14.34□□□□□ -0.11
ZNF546Q86UE3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 AC124016.1-201ENST00000609552 612 ntBASIC14.34□□□□□ -0.11
ZNF546Q86UE3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZNF546Q86UE3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms