Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 LYSMD4-203ENST00000378904 2122 ntBASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 MIR6787-201ENST00000616675 61 ntBASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 AC069120.2-201ENST00000524091 540 ntBASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 MIR658-201ENST00000385210 100 ntBASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 AC129492.6-201ENST00000611383 1305 ntBASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 AC140912.1-201ENST00000577171 1054 ntBASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VPS13BQ7Z7G8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC10.48□□□□□ -0.73
VPS13BQ7Z7G8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms