Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 LINC00982-205ENST00000420957 435 ntBASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 NME2P1-201ENST00000426182 414 ntBASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 AC140878.1-201ENST00000565277 250 ntBASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.85■□□□□ 0.77
OTOP1Q7RTM1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 GPS2P2-201ENST00000430745 888 ntBASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 AC079140.1-201ENST00000508039 487 ntBASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 IGHV3-42-201ENST00000520410 361 ntBASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 AC025048.6-201ENST00000634326 1161 ntBASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.84■□□□□ 0.77
OTOP1Q7RTM1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 AL596325.1-201ENST00000563991 1082 ntBASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 ACTL9-202ENST00000612068 1252 ntBASIC19.83■□□□□ 0.77
OTOP1Q7RTM1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
OTOP1Q7RTM1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
OTOP1Q7RTM1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.83■□□□□ 0.76
OTOP1Q7RTM1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
OTOP1Q7RTM1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
OTOP1Q7RTM1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.83■□□□□ 0.76
OTOP1Q7RTM1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
OTOP1Q7RTM1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
OTOP1Q7RTM1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
OTOP1Q7RTM1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
OTOP1Q7RTM1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.83■□□□□ 0.76
OTOP1Q7RTM1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
OTOP1Q7RTM1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
OTOP1Q7RTM1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
OTOP1Q7RTM1 AC020763.4-201ENST00000623414 4170 ntBASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 STK19B-204ENST00000512515 211 ntBASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
OTOP1Q7RTM1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms