Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 AC005521.1-201ENST00000393351 872 ntBASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 TSPY12P-201ENST00000421279 868 ntBASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 KRT18P38-201ENST00000449496 1282 ntBASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 AC112698.1-201ENST00000510299 916 ntBASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTCHD4Q6ZW05 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 AC093525.9-201ENST00000624961 1746 ntBASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 AC092053.1-201ENST00000605787 1936 ntBASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 FAM8A6P-201ENST00000407496 1135 ntBASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 RNF216P1-203ENST00000404404 2427 ntBASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PTCHD4Q6ZW05 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 IGHGP-201ENST00000390555 1178 ntBASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 KRT18P57-201ENST00000443599 1254 ntBASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PTCHD4Q6ZW05 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms