Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 RASA4DP-201ENST00000460726 1199 ntBASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 AP002414.4-201ENST00000589764 1148 ntBASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 AC007950.2-201ENST00000615045 2347 ntBASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 LINC00554-201ENST00000564841 3011 ntBASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCNI2Q6ZMN8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 AC092053.1-201ENST00000605787 1936 ntBASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCNI2Q6ZMN8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 AC034232.1-201ENST00000506026 1064 ntBASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCNI2Q6ZMN8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.27■□□□□ 0.51
CCNI2Q6ZMN8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.27■□□□□ 0.51
CCNI2Q6ZMN8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCNI2Q6ZMN8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.27■□□□□ 0.51
CCNI2Q6ZMN8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCNI2Q6ZMN8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNI2Q6ZMN8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCNI2Q6ZMN8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNI2Q6ZMN8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNI2Q6ZMN8 AC103702.1-201ENST00000548801 2630 ntBASIC18.26■□□□□ 0.51
CCNI2Q6ZMN8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCNI2Q6ZMN8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCNI2Q6ZMN8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.26■□□□□ 0.51
CCNI2Q6ZMN8 AC022188.1-201ENST00000620960 1664 ntBASIC18.26■□□□□ 0.51
CCNI2Q6ZMN8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.26■□□□□ 0.51
CCNI2Q6ZMN8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.26■□□□□ 0.51
CCNI2Q6ZMN8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms