Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 AC079328.2-201ENST00000561241 3354 ntBASIC17.6■□□□□ 0.41
CASC4Q6P4E1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CASC4Q6P4E1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 AC005915.1-201ENST00000624912 2018 ntBASIC17.59■□□□□ 0.41
CASC4Q6P4E1 AC092053.1-201ENST00000605787 1936 ntBASIC17.59■□□□□ 0.41
CASC4Q6P4E1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 AL049757.1-201ENST00000616842 1596 ntBASIC17.59■□□□□ 0.41
CASC4Q6P4E1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 KRT8P10-201ENST00000450021 1447 ntBASIC17.59■□□□□ 0.41
CASC4Q6P4E1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 AL031133.1-201ENST00000406807 723 ntBASIC17.59■□□□□ 0.41
CASC4Q6P4E1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.59■□□□□ 0.41
CASC4Q6P4E1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CASC4Q6P4E1 AC005332.1-201ENST00000577698 1310 ntBASIC17.58■□□□□ 0.4
CASC4Q6P4E1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 CHCHD2P8-201ENST00000429873 447 ntBASIC17.58■□□□□ 0.4
CASC4Q6P4E1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 NTF6B-201ENST00000591913 560 ntBASIC17.58■□□□□ 0.4
CASC4Q6P4E1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CASC4Q6P4E1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CASC4Q6P4E1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms