Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 IGHV3-47-201ENST00000425060 335 ntBASIC19.64■□□□□ 0.73
ATL3Q6DD88 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 NUS1P1-201ENST00000446295 882 ntBASIC19.64■□□□□ 0.73
ATL3Q6DD88 MINOS1P3-201ENST00000457048 203 ntBASIC19.64■□□□□ 0.73
ATL3Q6DD88 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATL3Q6DD88 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATL3Q6DD88 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATL3Q6DD88 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATL3Q6DD88 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATL3Q6DD88 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATL3Q6DD88 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATL3Q6DD88 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATL3Q6DD88 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATL3Q6DD88 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.64■□□□□ 0.73
ATL3Q6DD88 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATL3Q6DD88 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATL3Q6DD88 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATL3Q6DD88 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATL3Q6DD88 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.63■□□□□ 0.73
ATL3Q6DD88 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ATL3Q6DD88 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ATL3Q6DD88 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.63■□□□□ 0.73
ATL3Q6DD88 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
ATL3Q6DD88 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ATL3Q6DD88 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.63■□□□□ 0.73
ATL3Q6DD88 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.63■□□□□ 0.73
ATL3Q6DD88 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ATL3Q6DD88 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 RCN1P2-201ENST00000398357 915 ntBASIC19.63■□□□□ 0.73
ATL3Q6DD88 SPDYE21P-201ENST00000413323 827 ntBASIC19.63■□□□□ 0.73
ATL3Q6DD88 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.63■□□□□ 0.73
ATL3Q6DD88 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 DUX4L17-201ENST00000557360 1267 ntBASIC19.63■□□□□ 0.73
ATL3Q6DD88 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.63■□□□□ 0.73
ATL3Q6DD88 AC114341.1-201ENST00000618070 349 ntBASIC19.63■□□□□ 0.73
ATL3Q6DD88 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ATL3Q6DD88 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATL3Q6DD88 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.63■□□□□ 0.73
ATL3Q6DD88 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL3Q6DD88 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL3Q6DD88 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.62■□□□□ 0.73
ATL3Q6DD88 UBALD1-205ENST00000590891 2641 ntBASIC19.62■□□□□ 0.73
ATL3Q6DD88 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL3Q6DD88 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL3Q6DD88 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL3Q6DD88 NSUN5P1-202ENST00000421140 1535 ntBASIC19.62■□□□□ 0.73
ATL3Q6DD88 NSUN5P2-203ENST00000457352 1529 ntBASIC19.62■□□□□ 0.73
ATL3Q6DD88 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.62■□□□□ 0.73
ATL3Q6DD88 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL3Q6DD88 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL3Q6DD88 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.62■□□□□ 0.73
ATL3Q6DD88 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL3Q6DD88 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.62■□□□□ 0.73
ATL3Q6DD88 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL3Q6DD88 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.62■□□□□ 0.73
ATL3Q6DD88 AL645728.1-201ENST00000366221 2101 ntBASIC19.62■□□□□ 0.73
ATL3Q6DD88 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATL3Q6DD88 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATL3Q6DD88 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.62■□□□□ 0.73
ATL3Q6DD88 AP002383.4-201ENST00000442518 975 ntBASIC19.62■□□□□ 0.73
ATL3Q6DD88 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATL3Q6DD88 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.62■□□□□ 0.73
ATL3Q6DD88 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATL3Q6DD88 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.62■□□□□ 0.73
ATL3Q6DD88 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
ATL3Q6DD88 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.62■□□□□ 0.73
ATL3Q6DD88 AC073592.4-201ENST00000623827 446 ntBASIC19.62■□□□□ 0.73
ATL3Q6DD88 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATL3Q6DD88 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.62■□□□□ 0.73
ATL3Q6DD88 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.62■□□□□ 0.73
ATL3Q6DD88 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATL3Q6DD88 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms