Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MFAP1P1-201ENST00000442257 1255 ntBASIC16.27■□□□□ 0.2
LPCAT4Q643R3 AL355355.2-201ENST00000442321 338 ntBASIC16.27■□□□□ 0.2
LPCAT4Q643R3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.27■□□□□ 0.2
LPCAT4Q643R3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.27■□□□□ 0.2
LPCAT4Q643R3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.27■□□□□ 0.2
LPCAT4Q643R3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.27■□□□□ 0.2
LPCAT4Q643R3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.27■□□□□ 0.2
LPCAT4Q643R3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LPCAT4Q643R3 AC110285.5-201ENST00000611501 352 ntBASIC16.27■□□□□ 0.2
LPCAT4Q643R3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LPCAT4Q643R3 AC112497.1-201ENST00000624824 639 ntBASIC16.27■□□□□ 0.2
LPCAT4Q643R3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.27■□□□□ 0.2
LPCAT4Q643R3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.27■□□□□ 0.2
LPCAT4Q643R3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LPCAT4Q643R3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LPCAT4Q643R3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 AP003097.1-201ENST00000530657 1135 ntBASIC16.26■□□□□ 0.19
LPCAT4Q643R3 AC142086.2-201ENST00000569753 217 ntBASIC16.26■□□□□ 0.19
LPCAT4Q643R3 AC010240.3-201ENST00000607688 395 ntBASIC16.26■□□□□ 0.19
LPCAT4Q643R3 AC124016.1-201ENST00000609552 612 ntBASIC16.26■□□□□ 0.19
LPCAT4Q643R3 CR769767.2-201ENST00000622735 460 ntBASIC16.26■□□□□ 0.19
LPCAT4Q643R3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LPCAT4Q643R3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 AL353807.1-201ENST00000427475 662 ntBASIC16.25■□□□□ 0.19
LPCAT4Q643R3 RNA5SP413-201ENST00000516373 109 ntBASIC16.25■□□□□ 0.19
LPCAT4Q643R3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 AC099063.4-201ENST00000641099 1602 ntBASIC16.25■□□□□ 0.19
LPCAT4Q643R3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LPCAT4Q643R3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LPCAT4Q643R3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms