Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 AC005412.3-201ENST00000580309 715 ntBASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 CYP2A7P1-201ENST00000595391 815 ntBASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 AC018529.1-201ENST00000613063 361 ntBASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC11.4□□□□□ -0.58
VPS13DQ5THJ4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
VPS13DQ5THJ4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
VPS13DQ5THJ4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.59
VPS13DQ5THJ4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
VPS13DQ5THJ4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
VPS13DQ5THJ4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 AC004408.2-201ENST00000623613 2777 ntBASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 ACA64.2-201ENST00000459014 129 ntBASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 AC119751.2-201ENST00000504529 210 ntBASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 RNU1-129P-201ENST00000384064 167 ntBASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 TMEM14DP-201ENST00000422205 345 ntBASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 AL513480.1-201ENST00000451731 511 ntBASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 U1.21-201ENST00000580816 167 ntBASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 ABALON-201ENST00000629058 1903 ntBASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 AC027369.6-201ENST00000525520 931 ntBASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13DQ5THJ4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
VPS13DQ5THJ4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms