Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.17■□□□□ 0.5
VARS2Q5ST30 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
VARS2Q5ST30 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.17■□□□□ 0.5
VARS2Q5ST30 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARS2Q5ST30 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VARS2Q5ST30 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.17■□□□□ 0.5
VARS2Q5ST30 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
VARS2Q5ST30 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARS2Q5ST30 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VARS2Q5ST30 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VARS2Q5ST30 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.16■□□□□ 0.5
VARS2Q5ST30 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.16■□□□□ 0.5
VARS2Q5ST30 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.16■□□□□ 0.5
VARS2Q5ST30 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.16■□□□□ 0.5
VARS2Q5ST30 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.16■□□□□ 0.5
VARS2Q5ST30 AP002472.1-201ENST00000577490 586 ntBASIC18.16■□□□□ 0.5
VARS2Q5ST30 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VARS2Q5ST30 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VARS2Q5ST30 AC239800.4-201ENST00000603712 296 ntBASIC18.16■□□□□ 0.5
VARS2Q5ST30 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 AC134043.2-201ENST00000624206 2238 ntBASIC18.16■□□□□ 0.5
VARS2Q5ST30 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
VARS2Q5ST30 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.16■□□□□ 0.5
VARS2Q5ST30 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VARS2Q5ST30 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARS2Q5ST30 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARS2Q5ST30 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARS2Q5ST30 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARS2Q5ST30 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.15■□□□□ 0.5
VARS2Q5ST30 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.15■□□□□ 0.5
VARS2Q5ST30 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARS2Q5ST30 HTR7P1-202ENST00000624664 4411 ntBASIC18.15■□□□□ 0.5
VARS2Q5ST30 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VARS2Q5ST30 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARS2Q5ST30 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARS2Q5ST30 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.15■□□□□ 0.5
VARS2Q5ST30 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VARS2Q5ST30 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.15■□□□□ 0.5
VARS2Q5ST30 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.15■□□□□ 0.5
VARS2Q5ST30 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARS2Q5ST30 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VARS2Q5ST30 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARS2Q5ST30 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARS2Q5ST30 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARS2Q5ST30 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VARS2Q5ST30 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VARS2Q5ST30 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
VARS2Q5ST30 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VARS2Q5ST30 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
VARS2Q5ST30 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARS2Q5ST30 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARS2Q5ST30 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARS2Q5ST30 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 REXO1L3P-201ENST00000622202 1288 ntBASIC18.14■□□□□ 0.49
VARS2Q5ST30 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARS2Q5ST30 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARS2Q5ST30 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VARS2Q5ST30 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VARS2Q5ST30 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARS2Q5ST30 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARS2Q5ST30 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARS2Q5ST30 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARS2Q5ST30 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARS2Q5ST30 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VARS2Q5ST30 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms