Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KHDC1Q4VXA5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 EMBP1-201ENST00000458200 901 ntBASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 AL121894.2-201ENST00000602977 491 ntBASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KHDC1Q4VXA5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 AC122714.2-201ENST00000502787 707 ntBASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 AC111152.3-201ENST00000569699 673 ntBASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 RN7SL510P-201ENST00000581311 263 ntBASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 AP001269.4-201ENST00000609611 512 ntBASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 AC019129.2-201ENST00000609837 1235 ntBASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 AL691432.3-201ENST00000621860 400 ntBASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 BX276092.7-203ENST00000637198 1536 ntBASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.46■□□□□ 0.39
KHDC1Q4VXA5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
KHDC1Q4VXA5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
KHDC1Q4VXA5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
KHDC1Q4VXA5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.46■□□□□ 0.38
KHDC1Q4VXA5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 AL138688.1-201ENST00000624851 1594 ntBASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.45■□□□□ 0.38
KHDC1Q4VXA5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms