Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 AC112497.1-201ENST00000624824 639 ntBASIC18.27■□□□□ 0.52
ERCC6LQ2NKX8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.27■□□□□ 0.51
ERCC6LQ2NKX8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.27■□□□□ 0.51
ERCC6LQ2NKX8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ERCC6LQ2NKX8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 MFAP1P1-201ENST00000442257 1255 ntBASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 CA15P1-201ENST00000481698 905 ntBASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 AC010240.3-201ENST00000607688 395 ntBASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 AC124016.1-201ENST00000609552 612 ntBASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 CR769767.2-201ENST00000622735 460 ntBASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ERCC6LQ2NKX8 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 MTHFR-217ENST00000641820 1569 ntBASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 AC099063.4-201ENST00000641099 1602 ntBASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 AC006058.3-201ENST00000606217 1069 ntBASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.25■□□□□ 0.51
ERCC6LQ2NKX8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms