Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNA1Q09470 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNA1Q09470 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNA1Q09470 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.9■□□□□ 0.62
KCNA1Q09470 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.9■□□□□ 0.62
KCNA1Q09470 OR7E14P-202ENST00000530490 1290 ntBASIC18.9■□□□□ 0.62
KCNA1Q09470 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.9■□□□□ 0.62
KCNA1Q09470 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNA1Q09470 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNA1Q09470 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.9■□□□□ 0.62
KCNA1Q09470 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
KCNA1Q09470 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNA1Q09470 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KCNA1Q09470 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNA1Q09470 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
KCNA1Q09470 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.89■□□□□ 0.62
KCNA1Q09470 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.89■□□□□ 0.62
KCNA1Q09470 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.89■□□□□ 0.62
KCNA1Q09470 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
KCNA1Q09470 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
KCNA1Q09470 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
KCNA1Q09470 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.89■□□□□ 0.61
KCNA1Q09470 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA1Q09470 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.89■□□□□ 0.61
KCNA1Q09470 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA1Q09470 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA1Q09470 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA1Q09470 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.89■□□□□ 0.61
KCNA1Q09470 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA1Q09470 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.89■□□□□ 0.61
KCNA1Q09470 AC073621.1-201ENST00000392730 636 ntBASIC18.89■□□□□ 0.61
KCNA1Q09470 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.89■□□□□ 0.61
KCNA1Q09470 ELK2BP-201ENST00000415014 1224 ntBASIC18.89■□□□□ 0.61
KCNA1Q09470 KRT18P27-201ENST00000427733 1299 ntBASIC18.89■□□□□ 0.61
KCNA1Q09470 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.89■□□□□ 0.61
KCNA1Q09470 AF186996.4-201ENST00000467186 377 ntBASIC18.89■□□□□ 0.61
KCNA1Q09470 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
KCNA1Q09470 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA1Q09470 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.89■□□□□ 0.61
KCNA1Q09470 FAM215A-202ENST00000632077 792 ntBASIC18.89■□□□□ 0.61
KCNA1Q09470 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA1Q09470 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA1Q09470 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA1Q09470 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.89■□□□□ 0.61
KCNA1Q09470 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
KCNA1Q09470 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
KCNA1Q09470 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA1Q09470 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA1Q09470 FRMD8P1-201ENST00000440433 1524 ntBASIC18.89■□□□□ 0.61
KCNA1Q09470 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA1Q09470 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KCNA1Q09470 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.88■□□□□ 0.61
KCNA1Q09470 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA1Q09470 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.88■□□□□ 0.61
KCNA1Q09470 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
KCNA1Q09470 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.88■□□□□ 0.61
KCNA1Q09470 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA1Q09470 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA1Q09470 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA1Q09470 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA1Q09470 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA1Q09470 LAGE3P1-201ENST00000425356 484 ntBASIC18.88■□□□□ 0.61
KCNA1Q09470 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA1Q09470 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
KCNA1Q09470 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.88■□□□□ 0.61
KCNA1Q09470 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.88■□□□□ 0.61
KCNA1Q09470 MIR7706-201ENST00000613747 67 ntBASIC18.88■□□□□ 0.61
KCNA1Q09470 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.88■□□□□ 0.61
KCNA1Q09470 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.88■□□□□ 0.61
KCNA1Q09470 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.88■□□□□ 0.61
KCNA1Q09470 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.88■□□□□ 0.61
KCNA1Q09470 AP002414.3-201ENST00000589352 1468 ntBASIC18.88■□□□□ 0.61
KCNA1Q09470 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA1Q09470 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA1Q09470 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA1Q09470 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA1Q09470 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
KCNA1Q09470 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA1Q09470 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
KCNA1Q09470 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
KCNA1Q09470 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KCNA1Q09470 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA1Q09470 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA1Q09470 BCL2-203ENST00000589955 5011 ntBASIC18.87■□□□□ 0.61
KCNA1Q09470 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA1Q09470 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA1Q09470 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA1Q09470 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA1Q09470 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA1Q09470 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA1Q09470 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA1Q09470 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA1Q09470 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KCNA1Q09470 GPR89P-201ENST00000407924 1495 ntBASIC18.87■□□□□ 0.61
KCNA1Q09470 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.87■□□□□ 0.61
KCNA1Q09470 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.87■□□□□ 0.61
KCNA1Q09470 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.87■□□□□ 0.61
KCNA1Q09470 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.87■□□□□ 0.61
KCNA1Q09470 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
KCNA1Q09470 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms