Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.92□□□□□ -0.18
CX3CL1P78423 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
CX3CL1P78423 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.92□□□□□ -0.18
CX3CL1P78423 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.92□□□□□ -0.18
CX3CL1P78423 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.92□□□□□ -0.18
CX3CL1P78423 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.92□□□□□ -0.18
CX3CL1P78423 AL139327.4-201ENST00000612362 153 ntBASIC13.92□□□□□ -0.18
CX3CL1P78423 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.92□□□□□ -0.18
CX3CL1P78423 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.92□□□□□ -0.18
CX3CL1P78423 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CX3CL1P78423 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.92□□□□□ -0.18
CX3CL1P78423 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CX3CL1P78423 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.92□□□□□ -0.18
CX3CL1P78423 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.92□□□□□ -0.18
CX3CL1P78423 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CX3CL1P78423 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 LYSMD4-203ENST00000378904 2122 ntBASIC13.91□□□□□ -0.18
CX3CL1P78423 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
CX3CL1P78423 KRT8P10-201ENST00000450021 1447 ntBASIC13.91□□□□□ -0.18
CX3CL1P78423 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CX3CL1P78423 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CX3CL1P78423 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CL1P78423 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CX3CL1P78423 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.91□□□□□ -0.18
CX3CL1P78423 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.91□□□□□ -0.18
CX3CL1P78423 KRT16P4-201ENST00000453883 522 ntBASIC13.91□□□□□ -0.18
CX3CL1P78423 FOSL1P1-201ENST00000511041 816 ntBASIC13.91□□□□□ -0.18
CX3CL1P78423 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CL1P78423 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CL1P78423 MIR5100-201ENST00000579544 119 ntBASIC13.91□□□□□ -0.18
CX3CL1P78423 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.91□□□□□ -0.18
CX3CL1P78423 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.91□□□□□ -0.18
CX3CL1P78423 AL591684.3-201ENST00000605187 298 ntBASIC13.91□□□□□ -0.18
CX3CL1P78423 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.91□□□□□ -0.18
CX3CL1P78423 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CL1P78423 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC13.91□□□□□ -0.18
CX3CL1P78423 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.91□□□□□ -0.18
CX3CL1P78423 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CX3CL1P78423 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CX3CL1P78423 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CL1P78423 AL162727.3-201ENST00000635661 2787 ntBASIC13.91□□□□□ -0.18
CX3CL1P78423 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CL1P78423 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CL1P78423 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.9□□□□□ -0.18
CX3CL1P78423 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CL1P78423 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.9□□□□□ -0.18
CX3CL1P78423 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.9□□□□□ -0.18
CX3CL1P78423 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.9□□□□□ -0.18
CX3CL1P78423 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.9□□□□□ -0.18
CX3CL1P78423 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.9□□□□□ -0.18
CX3CL1P78423 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CL1P78423 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CL1P78423 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CX3CL1P78423 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CL1P78423 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CL1P78423 AL391005.1-201ENST00000623953 2435 ntBASIC13.9□□□□□ -0.18
CX3CL1P78423 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CX3CL1P78423 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.9□□□□□ -0.18
CX3CL1P78423 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.9□□□□□ -0.18
CX3CL1P78423 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CL1P78423 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.9□□□□□ -0.18
CX3CL1P78423 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CL1P78423 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.9□□□□□ -0.18
CX3CL1P78423 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CL1P78423 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CX3CL1P78423 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.9□□□□□ -0.18
CX3CL1P78423 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CL1P78423 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CL1P78423 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CL1P78423 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.9□□□□□ -0.18
CX3CL1P78423 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.9□□□□□ -0.18
CX3CL1P78423 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CX3CL1P78423 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CX3CL1P78423 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CL1P78423 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CX3CL1P78423 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.9□□□□□ -0.18
CX3CL1P78423 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms