Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TSPY15P-201ENST00000457163 923 ntBASIC15.72■□□□□ 0.11
CXCR4P61073 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 AP002490.2-201ENST00000524791 560 ntBASIC15.72■□□□□ 0.11
CXCR4P61073 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.72■□□□□ 0.11
CXCR4P61073 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CXCR4P61073 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.72■□□□□ 0.11
CXCR4P61073 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.72■□□□□ 0.11
CXCR4P61073 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.72■□□□□ 0.11
CXCR4P61073 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
CXCR4P61073 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CXCR4P61073 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.72■□□□□ 0.11
CXCR4P61073 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CXCR4P61073 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 AC092364.2-201ENST00000596710 2692 ntBASIC15.71■□□□□ 0.11
CXCR4P61073 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 MMP23A-201ENST00000234610 1017 ntBASIC15.71■□□□□ 0.11
CXCR4P61073 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.71■□□□□ 0.11
CXCR4P61073 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.71■□□□□ 0.11
CXCR4P61073 AC024563.2-201ENST00000603282 481 ntBASIC15.71■□□□□ 0.11
CXCR4P61073 AC009154.2-201ENST00000621177 724 ntBASIC15.71■□□□□ 0.11
CXCR4P61073 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.71■□□□□ 0.11
CXCR4P61073 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CXCR4P61073 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CXCR4P61073 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CXCR4P61073 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CXCR4P61073 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
CXCR4P61073 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CXCR4P61073 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CXCR4P61073 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CXCR4P61073 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.7■□□□□ 0.1
CXCR4P61073 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CXCR4P61073 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.7■□□□□ 0.1
CXCR4P61073 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.7■□□□□ 0.1
CXCR4P61073 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
CXCR4P61073 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 MYCLP1-201ENST00000372451 1075 ntBASIC15.7■□□□□ 0.1
CXCR4P61073 ECEL1P3-201ENST00000427961 737 ntBASIC15.7■□□□□ 0.1
CXCR4P61073 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
CXCR4P61073 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.7■□□□□ 0.1
CXCR4P61073 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.7■□□□□ 0.1
CXCR4P61073 AC112698.1-201ENST00000510299 916 ntBASIC15.7■□□□□ 0.1
CXCR4P61073 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CXCR4P61073 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.7■□□□□ 0.1
CXCR4P61073 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.7■□□□□ 0.1
CXCR4P61073 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.7■□□□□ 0.1
CXCR4P61073 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms