Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HMGCS2P54868 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.73■□□□□ 0.75
HMGCS2P54868 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
HMGCS2P54868 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.73■□□□□ 0.75
HMGCS2P54868 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HMGCS2P54868 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGCS2P54868 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 UXT-AS1-201ENST00000590504 1525 ntBASIC19.73■□□□□ 0.75
HMGCS2P54868 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.73■□□□□ 0.75
HMGCS2P54868 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.73■□□□□ 0.75
HMGCS2P54868 KLF2P3-201ENST00000451977 1087 ntBASIC19.73■□□□□ 0.75
HMGCS2P54868 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 INGX-202ENST00000489074 768 ntBASIC19.73■□□□□ 0.75
HMGCS2P54868 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HMGCS2P54868 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.73■□□□□ 0.75
HMGCS2P54868 AC239800.4-201ENST00000603712 296 ntBASIC19.73■□□□□ 0.75
HMGCS2P54868 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
HMGCS2P54868 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HMGCS2P54868 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGCS2P54868 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HMGCS2P54868 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGCS2P54868 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HMGCS2P54868 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.73■□□□□ 0.75
HMGCS2P54868 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGCS2P54868 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.72■□□□□ 0.75
HMGCS2P54868 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
HMGCS2P54868 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGCS2P54868 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.72■□□□□ 0.75
HMGCS2P54868 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.72■□□□□ 0.75
HMGCS2P54868 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.72■□□□□ 0.75
HMGCS2P54868 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HMGCS2P54868 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
HMGCS2P54868 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.72■□□□□ 0.75
HMGCS2P54868 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.72■□□□□ 0.75
HMGCS2P54868 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.72■□□□□ 0.75
HMGCS2P54868 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.72■□□□□ 0.75
HMGCS2P54868 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HMGCS2P54868 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HMGCS2P54868 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMGCS2P54868 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS2P54868 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS2P54868 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.71■□□□□ 0.75
HMGCS2P54868 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
HMGCS2P54868 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS2P54868 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.71■□□□□ 0.75
HMGCS2P54868 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS2P54868 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.71■□□□□ 0.75
HMGCS2P54868 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS2P54868 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.71■□□□□ 0.75
HMGCS2P54868 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS2P54868 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS2P54868 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS2P54868 AC125807.1-201ENST00000483097 614 ntBASIC19.71■□□□□ 0.75
HMGCS2P54868 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.71■□□□□ 0.75
HMGCS2P54868 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.71■□□□□ 0.75
HMGCS2P54868 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.71■□□□□ 0.75
HMGCS2P54868 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.71■□□□□ 0.75
HMGCS2P54868 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS2P54868 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS2P54868 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.71■□□□□ 0.75
HMGCS2P54868 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS2P54868 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS2P54868 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS2P54868 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.71■□□□□ 0.75
HMGCS2P54868 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HMGCS2P54868 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS2P54868 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HMGCS2P54868 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms