Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
EPHB3P54753 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.91■□□□□ 0.46
EPHB3P54753 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.91■□□□□ 0.46
EPHB3P54753 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
EPHB3P54753 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
EPHB3P54753 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.91■□□□□ 0.46
EPHB3P54753 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.91■□□□□ 0.46
EPHB3P54753 AC004835.2-201ENST00000603762 682 ntBASIC17.91■□□□□ 0.46
EPHB3P54753 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
EPHB3P54753 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPHB3P54753 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPHB3P54753 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
EPHB3P54753 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EPHB3P54753 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPHB3P54753 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.91■□□□□ 0.46
EPHB3P54753 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.91■□□□□ 0.46
EPHB3P54753 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EPHB3P54753 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPHB3P54753 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPHB3P54753 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHB3P54753 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EPHB3P54753 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHB3P54753 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHB3P54753 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHB3P54753 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHB3P54753 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHB3P54753 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHB3P54753 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
EPHB3P54753 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHB3P54753 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
EPHB3P54753 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHB3P54753 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHB3P54753 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHB3P54753 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EPHB3P54753 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.9■□□□□ 0.46
EPHB3P54753 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EPHB3P54753 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHB3P54753 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
EPHB3P54753 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.9■□□□□ 0.46
EPHB3P54753 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHB3P54753 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
EPHB3P54753 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.9■□□□□ 0.46
EPHB3P54753 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.9■□□□□ 0.46
EPHB3P54753 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.9■□□□□ 0.46
EPHB3P54753 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHB3P54753 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHB3P54753 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.9■□□□□ 0.46
EPHB3P54753 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
EPHB3P54753 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHB3P54753 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
EPHB3P54753 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHB3P54753 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.9■□□□□ 0.46
EPHB3P54753 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.9■□□□□ 0.46
EPHB3P54753 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHB3P54753 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHB3P54753 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
EPHB3P54753 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
EPHB3P54753 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
EPHB3P54753 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
EPHB3P54753 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
EPHB3P54753 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
EPHB3P54753 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
EPHB3P54753 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
EPHB3P54753 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHB3P54753 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.89■□□□□ 0.45
EPHB3P54753 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHB3P54753 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.89■□□□□ 0.45
EPHB3P54753 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHB3P54753 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHB3P54753 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHB3P54753 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHB3P54753 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.89■□□□□ 0.45
EPHB3P54753 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.89■□□□□ 0.45
EPHB3P54753 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EPHB3P54753 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.89■□□□□ 0.45
EPHB3P54753 MIR4515-201ENST00000584082 81 ntBASIC17.89■□□□□ 0.45
EPHB3P54753 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.89■□□□□ 0.45
EPHB3P54753 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.89■□□□□ 0.45
EPHB3P54753 AL513210.1-201ENST00000629608 234 ntBASIC17.89■□□□□ 0.45
EPHB3P54753 AC105339.1-204ENST00000636249 355 ntBASIC17.89■□□□□ 0.45
EPHB3P54753 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
EPHB3P54753 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.89■□□□□ 0.45
EPHB3P54753 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHB3P54753 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.89■□□□□ 0.45
EPHB3P54753 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHB3P54753 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHB3P54753 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
EPHB3P54753 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHB3P54753 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EPHB3P54753 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHB3P54753 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.89■□□□□ 0.45
EPHB3P54753 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHB3P54753 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EPHB3P54753 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
EPHB3P54753 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHB3P54753 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EPHB3P54753 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EPHB3P54753 AL121761.2-201ENST00000598007 1648 ntBASIC17.88■□□□□ 0.45
EPHB3P54753 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
EPHB3P54753 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms