Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GPC3P51654 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.99■□□□□ 0.63
GPC3P51654 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GPC3P51654 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.99■□□□□ 0.63
GPC3P51654 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
GPC3P51654 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC3P51654 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC3P51654 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC3P51654 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC3P51654 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC3P51654 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC3P51654 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC3P51654 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC3P51654 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC3P51654 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC3P51654 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
GPC3P51654 AC139713.2-201ENST00000641328 2723 ntBASIC18.98■□□□□ 0.63
GPC3P51654 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.98■□□□□ 0.63
GPC3P51654 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.98■□□□□ 0.63
GPC3P51654 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC3P51654 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.98■□□□□ 0.63
GPC3P51654 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.98■□□□□ 0.63
GPC3P51654 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
GPC3P51654 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.98■□□□□ 0.63
GPC3P51654 MCCD1P2-201ENST00000423228 335 ntBASIC18.98■□□□□ 0.63
GPC3P51654 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.98■□□□□ 0.63
GPC3P51654 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.98■□□□□ 0.63
GPC3P51654 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.98■□□□□ 0.63
GPC3P51654 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.98■□□□□ 0.63
GPC3P51654 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.98■□□□□ 0.63
GPC3P51654 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.98■□□□□ 0.63
GPC3P51654 MIR3687-2-201ENST00000577708 61 ntBASIC18.98■□□□□ 0.63
GPC3P51654 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.98■□□□□ 0.63
GPC3P51654 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.98■□□□□ 0.63
GPC3P51654 MIR3687-1-201ENST00000614492 61 ntBASIC18.98■□□□□ 0.63
GPC3P51654 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.98■□□□□ 0.63
GPC3P51654 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC3P51654 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC3P51654 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC3P51654 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.98■□□□□ 0.63
GPC3P51654 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GPC3P51654 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GPC3P51654 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GPC3P51654 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
GPC3P51654 AL645608.8-201ENST00000606034 2086 ntBASIC18.97■□□□□ 0.63
GPC3P51654 AC141586.5-201ENST00000624546 2050 ntBASIC18.97■□□□□ 0.63
GPC3P51654 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
GPC3P51654 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.97■□□□□ 0.63
GPC3P51654 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.97■□□□□ 0.63
GPC3P51654 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
GPC3P51654 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.97■□□□□ 0.63
GPC3P51654 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.97■□□□□ 0.63
GPC3P51654 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GPC3P51654 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GPC3P51654 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.97■□□□□ 0.63
GPC3P51654 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.97■□□□□ 0.63
GPC3P51654 AL513190.1-201ENST00000621254 727 ntBASIC18.97■□□□□ 0.63
GPC3P51654 AC010507.1-201ENST00000633895 436 ntBASIC18.97■□□□□ 0.63
GPC3P51654 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
GPC3P51654 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GPC3P51654 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GPC3P51654 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GPC3P51654 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
GPC3P51654 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GPC3P51654 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
GPC3P51654 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
GPC3P51654 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
GPC3P51654 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.96■□□□□ 0.63
GPC3P51654 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.96■□□□□ 0.63
GPC3P51654 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.96■□□□□ 0.63
GPC3P51654 AC096734.2-201ENST00000562054 433 ntBASIC18.96■□□□□ 0.63
GPC3P51654 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.96■□□□□ 0.63
GPC3P51654 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.96■□□□□ 0.63
GPC3P51654 AL691403.2-201ENST00000618460 490 ntBASIC18.96■□□□□ 0.63
GPC3P51654 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.96■□□□□ 0.63
GPC3P51654 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
GPC3P51654 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC3P51654 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms