Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 RPS2P55-201ENST00000397318 883 ntBASIC14.89□□□□□ -0.03
CBX5P45973 AC007663.1-201ENST00000438948 1240 ntBASIC14.89□□□□□ -0.03
CBX5P45973 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.89□□□□□ -0.03
CBX5P45973 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 AC107956.1-201ENST00000494359 873 ntBASIC14.89□□□□□ -0.03
CBX5P45973 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.89□□□□□ -0.03
CBX5P45973 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 AC113410.3-201ENST00000623366 203 ntBASIC14.89□□□□□ -0.03
CBX5P45973 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.89□□□□□ -0.03
CBX5P45973 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.89□□□□□ -0.03
CBX5P45973 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CBX5P45973 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CBX5P45973 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.89□□□□□ -0.03
CBX5P45973 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.89□□□□□ -0.03
CBX5P45973 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CBX5P45973 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.89□□□□□ -0.03
CBX5P45973 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.89□□□□□ -0.03
CBX5P45973 AC104581.4-201ENST00000623126 3052 ntBASIC14.89□□□□□ -0.03
CBX5P45973 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CBX5P45973 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CBX5P45973 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.88□□□□□ -0.03
CBX5P45973 AC099063.4-201ENST00000641099 1602 ntBASIC14.88□□□□□ -0.03
CBX5P45973 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CBX5P45973 KRT8P47-201ENST00000604727 1398 ntBASIC14.88□□□□□ -0.03
CBX5P45973 TSPY26P-202ENST00000565928 3884 ntBASIC14.88□□□□□ -0.03
CBX5P45973 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CBX5P45973 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.88□□□□□ -0.03
CBX5P45973 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CBX5P45973 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CBX5P45973 C2orf69P3-201ENST00000565542 1120 ntBASIC14.88□□□□□ -0.03
CBX5P45973 AL512604.3-201ENST00000569583 964 ntBASIC14.88□□□□□ -0.03
CBX5P45973 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.88□□□□□ -0.03
CBX5P45973 AC024243.1-201ENST00000609234 778 ntBASIC14.88□□□□□ -0.03
CBX5P45973 AC026471.5-201ENST00000615068 467 ntBASIC14.88□□□□□ -0.03
CBX5P45973 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.88□□□□□ -0.03
CBX5P45973 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CBX5P45973 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CBX5P45973 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.88□□□□□ -0.03
CBX5P45973 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.88□□□□□ -0.03
CBX5P45973 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.88□□□□□ -0.03
CBX5P45973 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CBX5P45973 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CBX5P45973 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CBX5P45973 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CBX5P45973 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CBX5P45973 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CBX5P45973 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CBX5P45973 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CBX5P45973 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
CBX5P45973 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CBX5P45973 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CBX5P45973 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.87□□□□□ -0.03
CBX5P45973 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CBX5P45973 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CBX5P45973 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CBX5P45973 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CBX5P45973 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.87□□□□□ -0.03
CBX5P45973 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CBX5P45973 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CBX5P45973 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CBX5P45973 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CBX5P45973 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.87□□□□□ -0.03
CBX5P45973 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CBX5P45973 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms