Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HADHAP40939 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.45■□□□□ 0.38
HADHAP40939 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
HADHAP40939 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 AC009336.1-201ENST00000608941 1553 ntBASIC17.45■□□□□ 0.38
HADHAP40939 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.44■□□□□ 0.38
HADHAP40939 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.44■□□□□ 0.38
HADHAP40939 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HADHAP40939 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.44■□□□□ 0.38
HADHAP40939 LINC02012-201ENST00000608206 1725 ntBASIC17.44■□□□□ 0.38
HADHAP40939 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HADHAP40939 AC084018.2-201ENST00000613093 2607 ntBASIC17.44■□□□□ 0.38
HADHAP40939 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
HADHAP40939 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HADHAP40939 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.44■□□□□ 0.38
HADHAP40939 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.44■□□□□ 0.38
HADHAP40939 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.44■□□□□ 0.38
HADHAP40939 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.44■□□□□ 0.38
HADHAP40939 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.44■□□□□ 0.38
HADHAP40939 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.44■□□□□ 0.38
HADHAP40939 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.44■□□□□ 0.38
HADHAP40939 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.44■□□□□ 0.38
HADHAP40939 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.44■□□□□ 0.38
HADHAP40939 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 AC132938.5-201ENST00000624980 1813 ntBASIC17.44■□□□□ 0.38
HADHAP40939 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.44■□□□□ 0.38
HADHAP40939 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HADHAP40939 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HADHAP40939 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.43■□□□□ 0.38
HADHAP40939 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.43■□□□□ 0.38
HADHAP40939 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.43■□□□□ 0.38
HADHAP40939 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HADHAP40939 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HADHAP40939 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.43■□□□□ 0.38
HADHAP40939 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.43■□□□□ 0.38
HADHAP40939 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HADHAP40939 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HADHAP40939 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HADHAP40939 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HADHAP40939 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HADHAP40939 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HADHAP40939 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.42■□□□□ 0.38
HADHAP40939 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HADHAP40939 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms