Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6BP35913 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6BP35913 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6BP35913 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6BP35913 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC21.03■□□□□ 0.96
PDE6BP35913 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC21.03■□□□□ 0.96
PDE6BP35913 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC21.03■□□□□ 0.96
PDE6BP35913 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.03■□□□□ 0.96
PDE6BP35913 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6BP35913 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PDE6BP35913 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC21.03■□□□□ 0.96
PDE6BP35913 AL590560.3-201ENST00000623350 461 ntBASIC21.03■□□□□ 0.96
PDE6BP35913 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
PDE6BP35913 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6BP35913 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PDE6BP35913 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PDE6BP35913 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PDE6BP35913 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6BP35913 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6BP35913 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC21.02■□□□□ 0.96
PDE6BP35913 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.02■□□□□ 0.96
PDE6BP35913 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6BP35913 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6BP35913 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6BP35913 COQ9-214ENST00000567933 882 ntTSL 3 BASIC21.02■□□□□ 0.96
PDE6BP35913 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.02■□□□□ 0.96
PDE6BP35913 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6BP35913 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6BP35913 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6BP35913 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6BP35913 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6BP35913 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6BP35913 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PDE6BP35913 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6BP35913 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6BP35913 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PDE6BP35913 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.02■□□□□ 0.95
PDE6BP35913 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PDE6BP35913 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.02■□□□□ 0.95
PDE6BP35913 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6BP35913 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.01■□□□□ 0.95
PDE6BP35913 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PDE6BP35913 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.01■□□□□ 0.95
PDE6BP35913 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.01■□□□□ 0.95
PDE6BP35913 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6BP35913 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6BP35913 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6BP35913 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6BP35913 RN7SL692P-201ENST00000464677 288 ntBASIC21.01■□□□□ 0.95
PDE6BP35913 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.01■□□□□ 0.95
PDE6BP35913 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC21.01■□□□□ 0.95
PDE6BP35913 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6BP35913 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
PDE6BP35913 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.01■□□□□ 0.95
PDE6BP35913 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.01■□□□□ 0.95
PDE6BP35913 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6BP35913 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6BP35913 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6BP35913 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6BP35913 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PDE6BP35913 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6BP35913 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21■□□□□ 0.95
PDE6BP35913 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6BP35913 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6BP35913 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21■□□□□ 0.95
PDE6BP35913 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
PDE6BP35913 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDE6BP35913 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6BP35913 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6BP35913 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6BP35913 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6BP35913 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC21■□□□□ 0.95
PDE6BP35913 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21■□□□□ 0.95
PDE6BP35913 COX5BP8-201ENST00000416911 349 ntBASIC21■□□□□ 0.95
PDE6BP35913 TSSK5P-201ENST00000423978 907 ntBASIC21■□□□□ 0.95
PDE6BP35913 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC21■□□□□ 0.95
PDE6BP35913 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC21■□□□□ 0.95
PDE6BP35913 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21■□□□□ 0.95
PDE6BP35913 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21■□□□□ 0.95
PDE6BP35913 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PDE6BP35913 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PDE6BP35913 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
PDE6BP35913 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21■□□□□ 0.95
PDE6BP35913 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21■□□□□ 0.95
PDE6BP35913 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PDE6BP35913 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6BP35913 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PDE6BP35913 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6BP35913 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6BP35913 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21■□□□□ 0.95
PDE6BP35913 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PDE6BP35913 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
PDE6BP35913 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6BP35913 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PDE6BP35913 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6BP35913 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PDE6BP35913 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6BP35913 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6BP35913 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PDE6BP35913 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms