Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CKS2P33552 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12.72□□□□□ -0.37
CKS2P33552 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CKS2P33552 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.72□□□□□ -0.37
CKS2P33552 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.72□□□□□ -0.37
CKS2P33552 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.72□□□□□ -0.37
CKS2P33552 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CKS2P33552 MIR4674-201ENST00000582457 87 ntBASIC12.72□□□□□ -0.37
CKS2P33552 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.72□□□□□ -0.37
CKS2P33552 AC073195.1-201ENST00000607241 877 ntBASIC12.72□□□□□ -0.37
CKS2P33552 IKBKGP1-201ENST00000612193 1073 ntBASIC12.72□□□□□ -0.37
CKS2P33552 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC12.72□□□□□ -0.37
CKS2P33552 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CKS2P33552 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 AC105917.1-201ENST00000506637 2539 ntBASIC12.72□□□□□ -0.37
CKS2P33552 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CKS2P33552 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CKS2P33552 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CKS2P33552 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CKS2P33552 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CKS2P33552 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
CKS2P33552 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.72□□□□□ -0.37
CKS2P33552 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 BX276092.7-203ENST00000637198 1536 ntBASIC12.72□□□□□ -0.37
CKS2P33552 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CKS2P33552 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
CKS2P33552 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.72□□□□□ -0.37
CKS2P33552 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CKS2P33552 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CKS2P33552 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
CKS2P33552 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.71□□□□□ -0.37
CKS2P33552 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CKS2P33552 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.71□□□□□ -0.37
CKS2P33552 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CKS2P33552 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CKS2P33552 AC092053.1-201ENST00000605787 1936 ntBASIC12.71□□□□□ -0.37
CKS2P33552 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.71□□□□□ -0.37
CKS2P33552 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.71□□□□□ -0.37
CKS2P33552 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.71□□□□□ -0.37
CKS2P33552 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CKS2P33552 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
CKS2P33552 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
CKS2P33552 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
CKS2P33552 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
CKS2P33552 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CKS2P33552 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CKS2P33552 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CKS2P33552 AC093525.9-201ENST00000624961 1746 ntBASIC12.71□□□□□ -0.38
CKS2P33552 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.71□□□□□ -0.38
CKS2P33552 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CKS2P33552 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CKS2P33552 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
CKS2P33552 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.71□□□□□ -0.38
CKS2P33552 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CKS2P33552 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
CKS2P33552 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.7□□□□□ -0.38
CKS2P33552 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.7□□□□□ -0.38
CKS2P33552 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CKS2P33552 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms