Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 BX842568.4-201ENST00000421222 227 ntBASIC17.61■□□□□ 0.41
SLC6A4P31645 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A4P31645 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A4P31645 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A4P31645 AC092865.5-201ENST00000545435 363 ntBASIC17.61■□□□□ 0.41
SLC6A4P31645 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC6A4P31645 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
SLC6A4P31645 AL513190.1-201ENST00000621254 727 ntBASIC17.61■□□□□ 0.41
SLC6A4P31645 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
SLC6A4P31645 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A4P31645 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A4P31645 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A4P31645 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A4P31645 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.61■□□□□ 0.41
SLC6A4P31645 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SLC6A4P31645 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.61■□□□□ 0.41
SLC6A4P31645 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A4P31645 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SLC6A4P31645 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A4P31645 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC6A4P31645 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A4P31645 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A4P31645 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
SLC6A4P31645 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC6A4P31645 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC6A4P31645 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC6A4P31645 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A4P31645 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A4P31645 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SLC6A4P31645 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.6■□□□□ 0.41
SLC6A4P31645 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC6A4P31645 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC6A4P31645 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC6A4P31645 AC096734.2-201ENST00000562054 433 ntBASIC17.6■□□□□ 0.41
SLC6A4P31645 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC6A4P31645 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC6A4P31645 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.6■□□□□ 0.41
SLC6A4P31645 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC6A4P31645 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.6■□□□□ 0.41
SLC6A4P31645 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A4P31645 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A4P31645 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A4P31645 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC6A4P31645 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A4P31645 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SLC6A4P31645 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SLC6A4P31645 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC6A4P31645 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A4P31645 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.6■□□□□ 0.41
SLC6A4P31645 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A4P31645 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.6■□□□□ 0.41
SLC6A4P31645 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A4P31645 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A4P31645 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SLC6A4P31645 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC6A4P31645 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC6A4P31645 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC6A4P31645 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC6A4P31645 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC6A4P31645 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SLC6A4P31645 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC6A4P31645 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC6A4P31645 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC6A4P31645 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 YBX2P1-201ENST00000394192 760 ntBASIC17.59■□□□□ 0.41
SLC6A4P31645 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC6A4P31645 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.59■□□□□ 0.41
SLC6A4P31645 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.59■□□□□ 0.41
SLC6A4P31645 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC6A4P31645 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
SLC6A4P31645 RHOQP3-201ENST00000437982 621 ntBASIC17.59■□□□□ 0.41
SLC6A4P31645 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC6A4P31645 CXCL1P1-201ENST00000502804 216 ntBASIC17.59■□□□□ 0.41
SLC6A4P31645 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 AC107918.2-201ENST00000530817 355 ntBASIC17.59■□□□□ 0.41
SLC6A4P31645 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SLC6A4P31645 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 ACTL9-202ENST00000612068 1252 ntBASIC17.59■□□□□ 0.41
SLC6A4P31645 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.59■□□□□ 0.41
SLC6A4P31645 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SLC6A4P31645 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.59■□□□□ 0.41
SLC6A4P31645 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SLC6A4P31645 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SLC6A4P31645 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms