Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CASP1P29466 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CASP1P29466 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.25■□□□□ 0.67
CASP1P29466 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.25■□□□□ 0.67
CASP1P29466 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
CASP1P29466 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.25■□□□□ 0.67
CASP1P29466 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP1P29466 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP1P29466 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP1P29466 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP1P29466 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CASP1P29466 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP1P29466 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.25■□□□□ 0.67
CASP1P29466 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP1P29466 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CASP1P29466 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CASP1P29466 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CASP1P29466 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP1P29466 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP1P29466 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.24■□□□□ 0.67
CASP1P29466 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP1P29466 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CASP1P29466 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP1P29466 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP1P29466 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.24■□□□□ 0.67
CASP1P29466 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CASP1P29466 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.24■□□□□ 0.67
CASP1P29466 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.24■□□□□ 0.67
CASP1P29466 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CASP1P29466 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.24■□□□□ 0.67
CASP1P29466 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP1P29466 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.24■□□□□ 0.67
CASP1P29466 AL020989.1-201ENST00000422979 469 ntBASIC19.24■□□□□ 0.67
CASP1P29466 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.24■□□□□ 0.67
CASP1P29466 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.24■□□□□ 0.67
CASP1P29466 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CASP1P29466 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP1P29466 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CASP1P29466 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP1P29466 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.24■□□□□ 0.67
CASP1P29466 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CASP1P29466 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP1P29466 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CASP1P29466 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CASP1P29466 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CASP1P29466 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.23■□□□□ 0.67
CASP1P29466 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CASP1P29466 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASP1P29466 AL118508.1-201ENST00000613502 2345 ntBASIC19.23■□□□□ 0.67
CASP1P29466 AC097637.2-201ENST00000624096 1997 ntBASIC19.23■□□□□ 0.67
CASP1P29466 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.23■□□□□ 0.67
CASP1P29466 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.23■□□□□ 0.67
CASP1P29466 HCG4P8-203ENST00000443049 980 ntBASIC19.23■□□□□ 0.67
CASP1P29466 BX005266.1-201ENST00000473402 457 ntBASIC19.23■□□□□ 0.67
CASP1P29466 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CASP1P29466 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASP1P29466 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.23■□□□□ 0.67
CASP1P29466 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASP1P29466 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.23■□□□□ 0.67
CASP1P29466 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CASP1P29466 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.23■□□□□ 0.67
CASP1P29466 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.23■□□□□ 0.67
CASP1P29466 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CASP1P29466 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.22■□□□□ 0.67
CASP1P29466 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.22■□□□□ 0.67
CASP1P29466 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.22■□□□□ 0.67
CASP1P29466 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASP1P29466 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CASP1P29466 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CASP1P29466 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CASP1P29466 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CASP1P29466 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.22■□□□□ 0.67
CASP1P29466 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.22■□□□□ 0.67
CASP1P29466 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASP1P29466 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASP1P29466 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CASP1P29466 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.22■□□□□ 0.67
CASP1P29466 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.22■□□□□ 0.67
CASP1P29466 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASP1P29466 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CASP1P29466 PCDHB17P-201ENST00000539533 2393 ntBASIC19.22■□□□□ 0.67
CASP1P29466 PCDHB19P-201ENST00000570871 2371 ntBASIC19.22■□□□□ 0.67
CASP1P29466 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASP1P29466 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASP1P29466 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
CASP1P29466 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CASP1P29466 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASP1P29466 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.22■□□□□ 0.67
CASP1P29466 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CASP1P29466 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CASP1P29466 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CASP1P29466 AC079776.2-201ENST00000641154 1609 ntBASIC19.22■□□□□ 0.67
CASP1P29466 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASP1P29466 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.21■□□□□ 0.67
CASP1P29466 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASP1P29466 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASP1P29466 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CASP1P29466 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.21■□□□□ 0.67
CASP1P29466 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CASP1P29466 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms