Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTX3P26022 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTX3P26022 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PTX3P26022 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTX3P26022 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.53■□□□□ 0.24
PTX3P26022 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTX3P26022 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTX3P26022 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTX3P26022 EGFEM1P-202ENST00000431685 1563 ntBASIC16.53■□□□□ 0.24
PTX3P26022 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
PTX3P26022 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTX3P26022 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTX3P26022 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.53■□□□□ 0.24
PTX3P26022 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTX3P26022 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.53■□□□□ 0.24
PTX3P26022 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTX3P26022 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.53■□□□□ 0.24
PTX3P26022 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
PTX3P26022 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTX3P26022 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.53■□□□□ 0.24
PTX3P26022 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
PTX3P26022 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTX3P26022 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTX3P26022 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PTX3P26022 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.53■□□□□ 0.24
PTX3P26022 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.53■□□□□ 0.24
PTX3P26022 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTX3P26022 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.52■□□□□ 0.24
PTX3P26022 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTX3P26022 AC148477.5-201ENST00000625164 1645 ntBASIC16.52■□□□□ 0.24
PTX3P26022 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.52■□□□□ 0.24
PTX3P26022 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.52■□□□□ 0.24
PTX3P26022 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.52■□□□□ 0.24
PTX3P26022 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTX3P26022 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTX3P26022 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTX3P26022 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.52■□□□□ 0.24
PTX3P26022 AC011676.5-201ENST00000624864 2660 ntBASIC16.52■□□□□ 0.24
PTX3P26022 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PTX3P26022 RBM17P3-201ENST00000417687 1192 ntBASIC16.52■□□□□ 0.24
PTX3P26022 ACTG1P4-201ENST00000425123 1122 ntBASIC16.52■□□□□ 0.24
PTX3P26022 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.52■□□□□ 0.24
PTX3P26022 PRYP5-201ENST00000451909 266 ntBASIC16.52■□□□□ 0.24
PTX3P26022 KRT18P31-201ENST00000506277 1292 ntBASIC16.52■□□□□ 0.24
PTX3P26022 AC106795.1-205ENST00000512851 1056 ntBASIC16.52■□□□□ 0.24
PTX3P26022 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.52■□□□□ 0.24
PTX3P26022 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTX3P26022 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.52■□□□□ 0.24
PTX3P26022 AC091304.2-201ENST00000564639 760 ntBASIC16.52■□□□□ 0.24
PTX3P26022 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.52■□□□□ 0.24
PTX3P26022 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.52■□□□□ 0.24
PTX3P26022 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.52■□□□□ 0.24
PTX3P26022 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.52■□□□□ 0.24
PTX3P26022 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
PTX3P26022 AP001269.4-201ENST00000609611 512 ntBASIC16.52■□□□□ 0.24
PTX3P26022 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.52■□□□□ 0.24
PTX3P26022 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PTX3P26022 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTX3P26022 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.52■□□□□ 0.23
PTX3P26022 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTX3P26022 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
PTX3P26022 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PTX3P26022 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PTX3P26022 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PTX3P26022 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.51■□□□□ 0.23
PTX3P26022 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.51■□□□□ 0.23
PTX3P26022 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PTX3P26022 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PTX3P26022 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.51■□□□□ 0.23
PTX3P26022 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PTX3P26022 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PTX3P26022 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.51■□□□□ 0.23
PTX3P26022 TSPY19P-201ENST00000418461 509 ntBASIC16.51■□□□□ 0.23
PTX3P26022 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.51■□□□□ 0.23
PTX3P26022 TSPY18P-201ENST00000441642 509 ntBASIC16.51■□□□□ 0.23
PTX3P26022 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.51■□□□□ 0.23
PTX3P26022 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 PRELID1P1-202ENST00000567272 903 ntBASIC16.51■□□□□ 0.23
PTX3P26022 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.51■□□□□ 0.23
PTX3P26022 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.51■□□□□ 0.23
PTX3P26022 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PTX3P26022 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.51■□□□□ 0.23
PTX3P26022 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTX3P26022 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms