Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRD2P25440 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRD2P25440 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.53■□□□□ 0.56
BRD2P25440 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRD2P25440 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRD2P25440 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRD2P25440 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
BRD2P25440 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRD2P25440 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.53■□□□□ 0.56
BRD2P25440 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRD2P25440 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.53■□□□□ 0.56
BRD2P25440 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.53■□□□□ 0.56
BRD2P25440 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.53■□□□□ 0.56
BRD2P25440 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC18.53■□□□□ 0.56
BRD2P25440 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
BRD2P25440 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.53■□□□□ 0.56
BRD2P25440 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
BRD2P25440 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRD2P25440 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRD2P25440 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRD2P25440 AC145098.2-201ENST00000623593 3026 ntBASIC18.53■□□□□ 0.56
BRD2P25440 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRD2P25440 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
BRD2P25440 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.53■□□□□ 0.56
BRD2P25440 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRD2P25440 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BRD2P25440 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.53■□□□□ 0.56
BRD2P25440 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRD2P25440 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
BRD2P25440 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BRD2P25440 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
BRD2P25440 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
BRD2P25440 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.53■□□□□ 0.56
BRD2P25440 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
BRD2P25440 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
BRD2P25440 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BRD2P25440 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRD2P25440 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRD2P25440 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
BRD2P25440 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRD2P25440 AC004817.3-201ENST00000602957 2129 ntBASIC18.52■□□□□ 0.56
BRD2P25440 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BRD2P25440 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
BRD2P25440 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRD2P25440 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BRD2P25440 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.52■□□□□ 0.56
BRD2P25440 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRD2P25440 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BRD2P25440 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRD2P25440 SPDYE21P-201ENST00000413323 827 ntBASIC18.52■□□□□ 0.56
BRD2P25440 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.52■□□□□ 0.56
BRD2P25440 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRD2P25440 AC106795.1-205ENST00000512851 1056 ntBASIC18.52■□□□□ 0.56
BRD2P25440 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.52■□□□□ 0.56
BRD2P25440 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.52■□□□□ 0.56
BRD2P25440 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
BRD2P25440 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.52■□□□□ 0.56
BRD2P25440 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.52■□□□□ 0.56
BRD2P25440 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
BRD2P25440 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRD2P25440 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
BRD2P25440 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRD2P25440 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
BRD2P25440 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.52■□□□□ 0.56
BRD2P25440 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.52■□□□□ 0.55
BRD2P25440 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
BRD2P25440 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
BRD2P25440 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.52■□□□□ 0.55
BRD2P25440 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.52■□□□□ 0.55
BRD2P25440 PRAL-201ENST00000624952 3286 ntBASIC18.52■□□□□ 0.55
BRD2P25440 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
BRD2P25440 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.52■□□□□ 0.55
BRD2P25440 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
BRD2P25440 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
BRD2P25440 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.52■□□□□ 0.55
BRD2P25440 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRD2P25440 AC018695.7-201ENST00000624587 2492 ntBASIC18.51■□□□□ 0.55
BRD2P25440 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRD2P25440 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRD2P25440 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.51■□□□□ 0.55
BRD2P25440 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRD2P25440 AL135999.2-201ENST00000622438 1686 ntBASIC18.51■□□□□ 0.55
BRD2P25440 AC016396.2-201ENST00000562575 1417 ntBASIC18.51■□□□□ 0.55
BRD2P25440 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.51■□□□□ 0.55
BRD2P25440 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
BRD2P25440 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.51■□□□□ 0.55
BRD2P25440 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRD2P25440 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRD2P25440 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRD2P25440 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.51■□□□□ 0.55
BRD2P25440 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.51■□□□□ 0.55
BRD2P25440 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.51■□□□□ 0.55
BRD2P25440 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.51■□□□□ 0.55
BRD2P25440 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.51■□□□□ 0.55
BRD2P25440 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.51■□□□□ 0.55
BRD2P25440 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRD2P25440 REXO1L6P-202ENST00000619970 1078 ntBASIC18.51■□□□□ 0.55
BRD2P25440 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRD2P25440 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
BRD2P25440 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms