Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
COL8A2P25067 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL8A2P25067 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.55□□□□□ -0.08
COL8A2P25067 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
COL8A2P25067 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.55□□□□□ -0.08
COL8A2P25067 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL8A2P25067 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
COL8A2P25067 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL8A2P25067 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
COL8A2P25067 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
COL8A2P25067 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL8A2P25067 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.55□□□□□ -0.08
COL8A2P25067 VN2R19P-201ENST00000442399 1052 ntBASIC14.55□□□□□ -0.08
COL8A2P25067 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.55□□□□□ -0.08
COL8A2P25067 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.55□□□□□ -0.08
COL8A2P25067 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.55□□□□□ -0.08
COL8A2P25067 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.55□□□□□ -0.08
COL8A2P25067 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
COL8A2P25067 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.55□□□□□ -0.08
COL8A2P25067 AC040169.1-201ENST00000565382 521 ntBASIC14.55□□□□□ -0.08
COL8A2P25067 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
COL8A2P25067 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
COL8A2P25067 AC139530.3-201ENST00000620344 690 ntBASIC14.55□□□□□ -0.08
COL8A2P25067 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.55□□□□□ -0.08
COL8A2P25067 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
COL8A2P25067 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
COL8A2P25067 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL8A2P25067 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL8A2P25067 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.55□□□□□ -0.08
COL8A2P25067 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL8A2P25067 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL8A2P25067 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL8A2P25067 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL8A2P25067 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL8A2P25067 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL8A2P25067 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL8A2P25067 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL8A2P25067 PI4KAP1-204ENST00000612579 1703 ntBASIC14.55□□□□□ -0.08
COL8A2P25067 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.55□□□□□ -0.08
COL8A2P25067 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.55□□□□□ -0.08
COL8A2P25067 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.55□□□□□ -0.08
COL8A2P25067 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL8A2P25067 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
COL8A2P25067 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 AC009053.2-201ENST00000563701 2365 ntBASIC14.54□□□□□ -0.08
COL8A2P25067 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
COL8A2P25067 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
COL8A2P25067 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
COL8A2P25067 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 AP002414.1-201ENST00000391405 1147 ntBASIC14.54□□□□□ -0.08
COL8A2P25067 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
COL8A2P25067 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.54□□□□□ -0.08
COL8A2P25067 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.54□□□□□ -0.08
COL8A2P25067 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.54□□□□□ -0.08
COL8A2P25067 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.54□□□□□ -0.08
COL8A2P25067 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.54□□□□□ -0.08
COL8A2P25067 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
COL8A2P25067 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL8A2P25067 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
COL8A2P25067 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.54□□□□□ -0.08
COL8A2P25067 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
COL8A2P25067 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.53□□□□□ -0.08
COL8A2P25067 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
COL8A2P25067 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.53□□□□□ -0.08
COL8A2P25067 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
COL8A2P25067 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.53□□□□□ -0.08
COL8A2P25067 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.53□□□□□ -0.08
COL8A2P25067 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 MRPL20P1-201ENST00000400819 433 ntBASIC14.53□□□□□ -0.08
COL8A2P25067 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
COL8A2P25067 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.53□□□□□ -0.08
COL8A2P25067 PRSS29P-201ENST00000440800 595 ntBASIC14.53□□□□□ -0.08
COL8A2P25067 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms