Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LMNB1P20700 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LMNB1P20700 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LMNB1P20700 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LMNB1P20700 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
LMNB1P20700 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
LMNB1P20700 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMNB1P20700 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LMNB1P20700 AC007541.1-201ENST00000570282 1469 ntBASIC20.7■□□□□ 0.9
LMNB1P20700 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMNB1P20700 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LMNB1P20700 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.7■□□□□ 0.9
LMNB1P20700 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
LMNB1P20700 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMNB1P20700 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.7■□□□□ 0.9
LMNB1P20700 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.7■□□□□ 0.9
LMNB1P20700 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.7■□□□□ 0.9
LMNB1P20700 AC009477.1-201ENST00000452936 217 ntBASIC20.7■□□□□ 0.9
LMNB1P20700 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.7■□□□□ 0.9
LMNB1P20700 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LMNB1P20700 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LMNB1P20700 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LMNB1P20700 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.7■□□□□ 0.9
LMNB1P20700 AC084346.2-201ENST00000607097 949 ntBASIC20.7■□□□□ 0.9
LMNB1P20700 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.7■□□□□ 0.9
LMNB1P20700 AC018529.1-201ENST00000613063 361 ntBASIC20.7■□□□□ 0.9
LMNB1P20700 MIR6805-201ENST00000615055 62 ntBASIC20.7■□□□□ 0.9
LMNB1P20700 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMNB1P20700 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMNB1P20700 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.7■□□□□ 0.9
LMNB1P20700 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LMNB1P20700 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LMNB1P20700 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.69■□□□□ 0.9
LMNB1P20700 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNB1P20700 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
LMNB1P20700 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNB1P20700 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMNB1P20700 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMNB1P20700 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LMNB1P20700 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNB1P20700 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LMNB1P20700 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.69■□□□□ 0.9
LMNB1P20700 ACA64.2-201ENST00000459014 129 ntBASIC20.69■□□□□ 0.9
LMNB1P20700 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNB1P20700 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.69■□□□□ 0.9
LMNB1P20700 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.69■□□□□ 0.9
LMNB1P20700 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.69■□□□□ 0.9
LMNB1P20700 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.69■□□□□ 0.9
LMNB1P20700 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LMNB1P20700 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.69■□□□□ 0.9
LMNB1P20700 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.69■□□□□ 0.9
LMNB1P20700 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.69■□□□□ 0.9
LMNB1P20700 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.69■□□□□ 0.9
LMNB1P20700 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LMNB1P20700 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMNB1P20700 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.68■□□□□ 0.9
LMNB1P20700 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMNB1P20700 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LMNB1P20700 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.68■□□□□ 0.9
LMNB1P20700 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.68■□□□□ 0.9
LMNB1P20700 AL031598.1-201ENST00000561511 1773 ntBASIC20.68■□□□□ 0.9
LMNB1P20700 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMNB1P20700 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LMNB1P20700 AC079776.1-201ENST00000401540 1152 ntBASIC20.68■□□□□ 0.9
LMNB1P20700 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LMNB1P20700 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
LMNB1P20700 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMNB1P20700 INE1-201ENST00000456273 945 ntBASIC20.68■□□□□ 0.9
LMNB1P20700 HLA-V-204ENST00000476601 1289 ntBASIC20.68■□□□□ 0.9
LMNB1P20700 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LMNB1P20700 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.68■□□□□ 0.9
LMNB1P20700 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.68■□□□□ 0.9
LMNB1P20700 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.68■□□□□ 0.9
LMNB1P20700 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.68■□□□□ 0.9
LMNB1P20700 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LMNB1P20700 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LMNB1P20700 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.68■□□□□ 0.9
LMNB1P20700 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMNB1P20700 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMNB1P20700 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMNB1P20700 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMNB1P20700 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMNB1P20700 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.67■□□□□ 0.9
LMNB1P20700 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMNB1P20700 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMNB1P20700 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMNB1P20700 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.67■□□□□ 0.9
LMNB1P20700 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMNB1P20700 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.67■□□□□ 0.9
LMNB1P20700 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.67■□□□□ 0.9
LMNB1P20700 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.67■□□□□ 0.9
LMNB1P20700 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.67■□□□□ 0.9
LMNB1P20700 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.67■□□□□ 0.9
LMNB1P20700 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMNB1P20700 AC007967.4-201ENST00000614700 386 ntBASIC20.67■□□□□ 0.9
LMNB1P20700 GPER1-207ENST00000619052 571 ntTSL 2 BASIC20.67■□□□□ 0.9
LMNB1P20700 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.67■□□□□ 0.9
LMNB1P20700 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMNB1P20700 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMNB1P20700 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms