Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
CD53P19397 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD53P19397 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CD53P19397 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CD53P19397 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CD53P19397 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CD53P19397 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.68■□□□□ 0.1
CD53P19397 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.68■□□□□ 0.1
CD53P19397 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CD53P19397 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CD53P19397 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.68■□□□□ 0.1
CD53P19397 MINOS1P3-201ENST00000457048 203 ntBASIC15.68■□□□□ 0.1
CD53P19397 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.68■□□□□ 0.1
CD53P19397 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.68■□□□□ 0.1
CD53P19397 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.68■□□□□ 0.1
CD53P19397 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.68■□□□□ 0.1
CD53P19397 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CD53P19397 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CD53P19397 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.68■□□□□ 0.1
CD53P19397 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CD53P19397 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CD53P19397 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
CD53P19397 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.68■□□□□ 0.1
CD53P19397 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.68■□□□□ 0.1
CD53P19397 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.68■□□□□ 0.1
CD53P19397 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD53P19397 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CD53P19397 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.67■□□□□ 0.1
CD53P19397 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.67■□□□□ 0.1
CD53P19397 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.67■□□□□ 0.1
CD53P19397 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.67■□□□□ 0.1
CD53P19397 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 AL353692.3-201ENST00000407031 1396 ntBASIC15.67■□□□□ 0.1
CD53P19397 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.67■□□□□ 0.1
CD53P19397 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CD53P19397 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.67■□□□□ 0.1
CD53P19397 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CD53P19397 POM121L3P-201ENST00000419331 1163 ntBASIC15.67■□□□□ 0.1
CD53P19397 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.67■□□□□ 0.1
CD53P19397 FAM197Y8-203ENST00000450145 560 ntBASIC15.67■□□□□ 0.1
CD53P19397 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.67■□□□□ 0.1
CD53P19397 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.67■□□□□ 0.1
CD53P19397 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.67■□□□□ 0.1
CD53P19397 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.67■□□□□ 0.1
CD53P19397 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.67■□□□□ 0.1
CD53P19397 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CD53P19397 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.67■□□□□ 0.1
CD53P19397 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CD53P19397 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
CD53P19397 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.67■□□□□ 0.1
CD53P19397 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD53P19397 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CD53P19397 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CD53P19397 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.66■□□□□ 0.1
CD53P19397 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.66■□□□□ 0.1
CD53P19397 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.66■□□□□ 0.1
CD53P19397 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CD53P19397 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.66■□□□□ 0.1
CD53P19397 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CD53P19397 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms